CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.6101.2.S1_a_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.57 79.2 Ta.6101.2.S1_a_at CA697971 - - 3e-16 At3g48890 ATMP2 S.X. H.G.
0.70 87.2 Ta.11338.3.S1_a_at CA647367 - - 4e+0 At3g47200 unknown protein S.X. H.G.
0.63 83.1 TaAffx.30725.1.S1_s_at CA622632 - - 1e+0 At1g03170 unknown protein S.X. H.G.
0.63 83.1 Ta.13273.2.S1_a_at CA661231 - - 2e-11 At1g12760 protein binding / ubiquitin-protein ligase/ zinc ion binding S.X. H.G.
0.55 76.8 Ta.11338.1.S1_at BQ169872 - - 3e+0 At4g08593 unknown protein S.X. H.G.
0.50 72.4 Ta.3239.2.A1_a_at CA641606 - - 4e+0 At4g09775 - S.X. H.G.
0.40 58.4 Ta.5228.2.A1_a_at BJ283864 - - 2e+1 At5g38050 unknown protein S.X. H.G.
0.35 49.8 Ta.18508.1.S1_a_at CA652261 - - 4e-1 At4g37470 hydrolase, alpha/beta fold family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
7.9 98.7 GSM143506 Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 2 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
7.7 98.7 GSM143517 Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 3 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
7.3 98.6 GSM143505 Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 1 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
7.1 98.5 GSM143515 Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 1 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
6.7 98.4 GSM143507 Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 3 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
6.5 98.3 GSM143503 Thatcher_Lr34 (resistant), rust inoculated basal leaf, replication 2 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
6.5 98.3 GSM143509 Thatcher_Lr34 (resistant), mock inoculated basal leaf, replication 2 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
6.4 98.2 GSM143504 Thatcher_Lr34 (resistant), rust inoculated basal leaf, replication 3 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
6.3 98.2 GSM143502 Thatcher_Lr34 (resistant), rust inoculated basal leaf, replication 1 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
6.0 98.0 GSM143520 Thatcher_Lr34 (susceptible), rust inoculated distal leaf, replication 3 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.58 0 803 Ta.6101.1.S1_at CD937323 - - 2e-10 At3g48890 ATMP2 C.G. S.X.
0.11 1e-28 127 Ta.27188.1.S1_at BT009156.1 - - 1e-1 At5g52240 MSBP1 (membrane steroid binding protein 1) C.G. S.X.
0.10 2e-14 79 Ta.22762.3.S1_a_at CA614703 steroid membrane binding protein-like - 2e-16 At3g48890 ATMP2 C.G. S.X.
0.03 3e-4 46 Ta.6549.1.S1_at CA677504 - - 9e-3 At1g02405 proline-rich family protein C.G. S.X.
0.06 1e-3 44 Ta.330.2.S1_at CA678896 - - 4e+0 At4g15000 60S ribosomal protein L27 (RPL27C) C.G. S.X.
0.03 1e-3 44 Ta.330.1.S1_x_at BG905755 - - 2e-1 At2g30560 glycine-rich protein C.G. S.X.
0.03 1e-3 44 Ta.330.1.S1_at BG905755 - - 2e-1 At2g30560 glycine-rich protein C.G. S.X.
0.03 1e-3 44 Ta.330.1.S1_s_at BG905755 - - 2e-1 At2g30560 glycine-rich protein C.G. S.X.
0.03 1e-3 44 Ta.19160.1.S1_at CA648093 - - 7e-3 At1g75550 glycine-rich protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.18 3e-16 85 Arabidopsis thaliana At3g48890 824050 ATMP2 putative progesterone-binding protein homolog (Atmp2) mRNA, - - - C.G. S.X.
0.25 6e-34 145 Glycine max Gma.1144.2.S1_at BE821744 - - 3e-42 At3g48890 ATMP2 C.G. S.X.
0.59 0 757 Hordeum vulgare Contig10724_at Contig10724 - - 1e-10 At3g48890 ATMP2 C.G. S.X.
0.37 3e-89 329 Oryza sativa Os10g0502500 AK061824.1 - Cytochrome b5 domain containing protein 4e-14 At3g48890 ATMP2 C.G. S.X.
0.21 2e-15 83 Populus trichocarpa Ptp.2453.1.S1_at CV284013 hypothetical protein - 2e-28 At5g52240 MSBP1 (membrane steroid binding protein 1) C.G. S.X.
0.29 4e-10 63 Vitis vinifera 1609309_at CF568890 - - 4e-43 At3g48890 ATMP2 C.G. S.X.
0.22 4e-54 210 Zea mays Zm.8884.1.A1_at CF018008 hypothetical protein LOC100280133 - 3e-9 At3g48890 ATMP2 C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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