CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.6101.1.S1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.83 93.4 Ta.6101.1.S1_at CD937323 - - 2e-10 At3g48890 ATMP2 S.X. H.G.
0.83 93.4 Ta.6113.1.S1_at CA668966 - - 3e+0 At5g22300 NIT4 (NITRILASE 4) S.X. H.G.
0.60 81.0 Ta.6113.2.S1_x_at AJ611253 - - 2e+0 At2g46810 basic helix-loop-helix (bHLH) family protein S.X. H.G.
0.57 79.2 Ta.6113.1.S1_a_at CA668966 - - 3e+0 At5g22300 NIT4 (NITRILASE 4) S.X. H.G.
0.50 72.4 Ta.6101.2.S1_a_at CA697971 - - 3e-16 At3g48890 ATMP2 S.X. H.G.
0.31 42.7 Ta.24202.1.S1_s_at CA693707 - - 7e+0 At4g33640 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
9.7 99.1 GSM143502 Thatcher_Lr34 (resistant), rust inoculated basal leaf, replication 1 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
7.3 98.6 GSM143517 Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 3 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
7.0 98.5 GSM143506 Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 2 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
6.2 98.1 GSM143519 Thatcher_Lr34 (susceptible), rust inoculated distal leaf, replication 2 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
5.8 97.9 GSM143505 Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 1 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
4.9 97.3 GSM143507 Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 3 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
4.7 97.1 GSM143509 Thatcher_Lr34 (resistant), mock inoculated basal leaf, replication 2 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
4.6 97.0 GSM250914 Tc_7dpi_inoculated_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.5 96.9 GSM143516 Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 2 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
4.3 96.7 GSM143515 Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 1 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.58 0 803 Ta.6101.2.S1_a_at CA697971 - - 3e-16 At3g48890 ATMP2 C.G. S.X.
0.34 1e-84 313 Ta.24202.1.S1_s_at CA693707 - - 7e+0 At4g33640 unknown protein C.G. S.X.
0.13 7e-22 105 Ta.27188.1.S1_at BT009156.1 - - 1e-1 At5g52240 MSBP1 (membrane steroid binding protein 1) C.G. S.X.
0.17 2e-9 63 Ta.22762.3.S1_a_at CA614703 steroid membrane binding protein-like - 2e-16 At3g48890 ATMP2 C.G. S.X.
0.03 4e-2 40 Ta.6549.1.S1_at CA677504 - - 9e-3 At1g02405 proline-rich family protein C.G. S.X.
0.02 4e-2 40 Ta.21203.1.S1_at CD373805 - - 6e-4 At4g29520 - C.G. S.X.
0.02 1e-1 38 TaAffx.82156.1.S1_at CA676836 - - 1e+0 At5g01440 insulin-degrading enzyme-related C.G. S.X.
0.02 1e-1 38 Ta.4292.1.S1_at CK162447 - - 4e-2 At1g54215 proline-rich family protein C.G. S.X.
0.02 1e-1 38 Ta.4292.1.S1_x_at CK162447 - - 4e-2 At1g54215 proline-rich family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.22 2e-10 67 Arabidopsis thaliana At3g48890 824050 ATMP2 putative progesterone-binding protein homolog (Atmp2) mRNA, - - - C.G. S.X.
0.22 7e-29 129 Glycine max Gma.1144.2.S1_at BE821744 - - 3e-42 At3g48890 ATMP2 C.G. S.X.
0.87 0 1243 Hordeum vulgare Contig10724_at Contig10724 - - 1e-10 At3g48890 ATMP2 C.G. S.X.
0.34 3e-96 353 Oryza sativa Os10g0502500 AK061824.1 - Cytochrome b5 domain containing protein 4e-14 At3g48890 ATMP2 C.G. S.X.
0.13 2e-13 77 Populus trichocarpa Ptp.2453.1.S1_at CV284013 hypothetical protein - 2e-28 At5g52240 MSBP1 (membrane steroid binding protein 1) C.G. S.X.
0.22 1e-11 69 Vitis vinifera 1609309_at CF568890 - - 4e-43 At3g48890 ATMP2 C.G. S.X.
0.19 8e-29 127 Zea mays Zm.14411.2.S1_at AY104410.1 membrane steroid-binding protein 1 - 6e-10 At3g48890 ATMP2 C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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