Gene omics information

Query gene ID	Ta.6061.1.A1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.80	92.2	Ta.6061.1.A1_at	BJ272216	-	-	8e-1	At3g29300	unknown protein	S.X.	H.G.	Please select
0.55	76.8	Ta.3448.1.S1_at	CK206881	-	-	6e-1	At3g04560	unknown protein	S.X.	H.G.	Please select
0.50	72.4	Ta.6039.1.S1_at	CK168801	-	-	1e-8	At1g77180	chromatin protein family	S.X.	H.G.	Please select
0.47	67.9	Ta.12582.1.S1_at	BQ171814	-	-	2e+0	At5g51360	-	S.X.	H.G.	Please select
0.46	66.8	Ta.6685.1.S1_at	BQ168372	-	-	7e-2	At4g33210	F-box family protein (FBL15)	S.X.	H.G.	Please select
0.40	58.4	Ta.28597.1.S1_at	CF132965	-	-	1e-3	At5g21010	ATBPM5 (BTB-POZ and MATH domain 5)	S.X.	H.G.	Please select
0.39	56.1	Ta.2643.1.S1_at	CK154481	-	-	2e-7	At1g71790	F-actin capping protein beta subunit family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
4.3	96.7	GSM139920	Anther diplotene-anaphaseI rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.1	96.4	GSM139923	Anther telophaseI-telophaseII rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.0	96.3	GSM298091	Leaf tissue of Solstice at 9 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.9	96.1	GSM139922	Anther telophaseI-telophaseII rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.8	96.0	GSM139918	Anther leptotene-pachytene rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.6	95.6	GSM139917	Anther leptotene-pachytene rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.6	95.6	GSM139924	Anther telophaseI-telophaseII rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.6	95.6	GSM298076	Crown tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.5	95.4	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.5	95.4	GSM139921	Anther diplotene-anaphaseI rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.22	4e-92	339	Ta.6061.2.S1_at	CA689217	-	-	5e-1	At3g24250	glycine-rich protein	C.G.	S.X.	Please select
0.22	4e-92	339	Ta.6061.2.S1_x_at	CA689217	-	-	5e-1	At3g24250	glycine-rich protein	C.G.	S.X.	Please select
0.23	5e-61	236	TaAffx.4244.1.A1_at	CA747346	-	-	1e-1	At2g03780	translin family protein	C.G.	S.X.	Please select
0.04	4e-18	93	TaAffx.114829.1.S1_at	CA734325	-	-	1e+0	At5g38895	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.02	9e-1	36	Ta.7302.2.S1_at	BE428343	-	-	1e+0	At3g29300	unknown protein	C.G.	S.X.	Please select
0.01	9e-1	36	Ta.7302.1.S1_at	CD454547	-	-	4e-2	At5g40630	ubiquitin family protein	C.G.	S.X.	Please select
0.01	9e-1	36	Ta.25387.1.S1_at	CD454179	-	-	4e-1	At4g39340	unknown protein	C.G.	S.X.	Please select
0.01	9e-1	36	Ta.15265.1.S1_at	AY347532.1	-	-	3e-124	At1g43170	ARP1 (ARABIDOPSIS RIBOSOMAL PROTEIN 1)	C.G.	S.X.	Please select
0.01	3e+0	34	TaAffx.51135.1.S1_at	CA730578	-	-	4e+0	At1g63950	heavy-metal-associated domain-containing protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	8e-1	36	Arabidopsis thaliana	At3g29300	822587	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OMFBPV	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.02	7e-2	40	Glycine max	HgAffx.12001.1.S1_at	CB375981	-	-	4e-3	At1g43170	ARP1 (ARABIDOPSIS RIBOSOMAL PROTEIN 1)	C.G.	S.X.	Please select
0.56	0	1144	Hordeum vulgare	Contig10253_at	Contig10253	-	-	3e-1	At1g51745	-	C.G.	S.X.	Please select
0.23	5e-93	343	Oryza sativa	Os01g0367300	AK101567.1	-	Conserved hypothetical protein	2e+0	At2g19040	RALFL12 (RALF-LIKE 12)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.02	1e+0	36	Populus trichocarpa	PtpAffx.44134.4.S1_at	CV228495	-	-	6e-1	At5g22180	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	1e+0	34	Vitis vinifera	1619800_at	CF203389.1	-	-	1e-3	At5g59350	unknown protein	C.G.	S.X.	Please select
0.28	8e-101	367	Zea mays	Zm.5323.1.A1_at	CK827563	hypothetical protein LOC100194352	-	2e+0	At4g13968	-	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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