Gene omics information

Query gene ID	Ta.6041.1.A1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.73	89.1	Ta.6041.1.A1_at	BJ256589	-	-	6e-7	At2g17010	mechanosensitive ion channel domain-containing protein / MS ion channel domain-containing protein	S.X.	H.G.	Please select
0.73	89.1	Ta.6041.1.A1_x_at	BJ256589	-	-	6e-7	At2g17010	mechanosensitive ion channel domain-containing protein / MS ion channel domain-containing protein	S.X.	H.G.	Please select
0.60	81.0	Ta.6041.2.A1_at	BJ294973	-	-	1e+1	At5g62980	dihydroneopterin aldolase, putative	S.X.	H.G.	Please select
0.60	81.0	Ta.6041.2.A1_x_at	BJ294973	-	-	1e+1	At5g62980	dihydroneopterin aldolase, putative	S.X.	H.G.	Please select
0.47	67.9	Ta.1282.2.S1_x_at	CD896324	type 1 non-specific lipid transfer protein precursor	-	6e+0	At3g22630	PBD1 (20S PROTEASOME BETA SUBUNIT D1)	S.X.	H.G.	Please select
0.43	62.2	Ta.28695.3.S1_x_at	BQ606088	Metallothionein	-	5e-16	At3g09390	MT2A (METALLOTHIONEIN 2A)	S.X.	H.G.	Please select
0.40	58.4	Ta.1282.2.S1_at	CD896324	type 1 non-specific lipid transfer protein precursor	-	6e+0	At3g22630	PBD1 (20S PROTEASOME BETA SUBUNIT D1)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
8.2	98.8	GSM324491	Si+ B- rep2	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
6.1	98.1	GSM324495	Si+ B+ rep3	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
5.9	98.0	GSM298065	Leaf tissue of Paragon at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
5.8	97.9	GSM298068	Leaf tissue of Paragon at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.8	97.2	GSM143495	Jupateco_Lr34 (resistant), mock inoculated distal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
3.9	96.1	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.7	95.8	GSM324490	Si+ B- rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
3.7	95.8	GSM324494	Si+ B+ rep2	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
3.6	95.6	GSM324493	Si+ B+ rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
3.6	95.6	GSM324485	Si- B- rep2	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.95	0	1003	Ta.6041.1.A1_a_at	BJ256589	-	-	6e-7	At2g17010	mechanosensitive ion channel domain-containing protein / MS ion channel domain-containing protein	C.G.	S.X.	Please select
0.95	0	1003	Ta.6041.1.A1_x_at	BJ256589	-	-	6e-7	At2g17010	mechanosensitive ion channel domain-containing protein / MS ion channel domain-containing protein	C.G.	S.X.	Please select
0.56	3e-104	379	Ta.6041.2.A1_x_at	BJ294973	-	-	1e+1	At5g62980	dihydroneopterin aldolase, putative	C.G.	S.X.	Please select
0.56	3e-104	379	Ta.6041.2.A1_at	BJ294973	-	-	1e+1	At5g62980	dihydroneopterin aldolase, putative	C.G.	S.X.	Please select
0.45	1e-97	357	Ta.26244.1.S1_at	CD491651	-	-	2e+0	At3g14810	MSL5 (MECHANOSENSITIVE CHANNEL OF SMALL CONDUCTANCE-LIKE 5)	C.G.	S.X.	Please select
0.02	2e+0	34	TaAffx.80620.1.S1_at	CA694711	-	-	4e+0	At5g60670	60S ribosomal protein L12 (RPL12C)	C.G.	S.X.	Please select
0.03	2e+0	34	TaAffx.50377.1.S1_at	CA741809	-	-	1e-6	At2g17010	mechanosensitive ion channel domain-containing protein / MS ion channel domain-containing protein	C.G.	S.X.	Please select
0.01	2e+0	34	Ta.23008.1.S1_at	BJ262674	-	-	1e-2	At5g41600	BTI3 (VIRB2-INTERACTING PROTEIN 3)	C.G.	S.X.	Please select
0.01	9e+0	32	TaAffx.93425.1.S1_at	BJ218748	-	-	3e+0	At1g35140	PHI-1 (PHOSPHATE-INDUCED 1)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.06	6e-7	56	Arabidopsis thaliana	At2g17010	816204	mechanosensitive ion channel domain-containing protein / MS ion channel domain-containing protein	F:molecular_function unknown;P:biological_process unknown;C:membrane;BOPFAM	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	7e-1	36	Glycine max	GmaAffx.63973.1.S1_at	BI426895	-	-	3e+0	At4g20380	zinc finger protein (LSD1)	C.G.	S.X.	Please select
0.65	6e-104	377	Hordeum vulgare	Contig9205_at	Contig9205	-	-	5e-4	At1g53470	MSL4 (MECHANOSENSITIVE CHANNEL OF SMALL CONDUCTANCE-LIKE 4)	C.G.	S.X.	Please select
0.29	9e-63	242	Oryza sativa	Os02g0668000	AK101871.1	-	MscS Mechanosensitive ion channel family protein	1e-7	At2g17010	mechanosensitive ion channel domain-containing protein / MS ion channel domain-containing protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.05	1e-5	52	Populus trichocarpa	PtpAffx.209920.1.S1_at	pmrna19550	hypothetical protein	-	4e-21	At1g78610	MSL6 (MECHANOSENSITIVE CHANNEL OF SMALL CONDUCTANCE-LIKE 6)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.02	2e+0	32	Vitis vinifera	1616136_at	CF215091	hypothetical protein LOC100242762	-	1e-31	At5g17920	ATMS1	C.G.	S.X.	Please select
0.02	6e-2	38	Zea mays	Zm.6081.1.S1_at	AY108128.1	hypothetical protein LOC100276151	-	1e-1	At2g27730	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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