Gene omics information

Query gene ID Ta.5934.1.S1_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6081.0Ta.5934.1.S1_atCD888662--4e-15At2g20280zinc finger (CCCH-type) family proteinS.X.H.G.
0.6383.1Ta.4408.1.A1_atBJ265880--2e+0At4g35750Rho-GTPase-activating protein-relatedS.X.H.G.
0.5273.7Ta.2136.1.S1_atBJ320333--7e-9At1g50200ALATS (ALANYL-TRNA SYNTHETASE)S.X.H.G.
0.4058.4Ta.25019.1.S1_atBT009274.1--9e-5At2g23350PAB4 (POLY(A) BINDING PROTEIN 4)S.X.H.G.
0.3753.0Ta.14349.1.S1_x_atCK161301--9e-26At1g4500026S proteasome regulatory complex subunit p42D, putativeS.X.H.G.
0.3651.9Ta.2706.3.S1_atCK205780--2e-15At1g79920ATP bindingS.X.H.G.
0.3549.8Ta.2490.1.S1_atBJ250631--4e-46At3g59990MAP2B (METHIONINE AMINOPEPTIDASE 2B)S.X.H.G.
0.3346.9Ta.735.1.S1_atCK215595--2e-66At3g62120tRNA synthetase class II (G, H, P and S) family proteinS.X.H.G.
0.2735.6Ta.23008.1.S1_atBJ262674--1e-2At5g41600BTI3 (VIRB2-INTERACTING PROTEIN 3)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
5.197.5GSM139920Anther diplotene-anaphaseI rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.197.5GSM139916Anther leptotene-pachytene rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.596.9GSM139918Anther leptotene-pachytene rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.596.9GSM139921Anther diplotene-anaphaseI rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.396.7GSM139917Anther leptotene-pachytene rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.096.3GSM139929Anther immature pollen rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.096.3GSM139919Anther diplotene-anaphaseI rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.695.6GSM139924Anther telophaseI-telophaseII rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.695.6GSM139922Anther telophaseI-telophaseII rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.395.0GSM139923Anther telophaseI-telophaseII rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.390753TaAffx.38382.1.S1_s_atBJ235350--1e-5At2g20280zinc finger (CCCH-type) family proteinC.G.S.X.
0.402e-131470Ta.5934.2.S1_x_atCA659454--2e-5At2g20280zinc finger (CCCH-type) family proteinC.G.S.X.
0.023e-344Ta.8666.1.S1_atBQ162196--2e-2At5g28630glycine-rich proteinC.G.S.X.
0.021e-242TaAffx.78140.1.S1_atCA737007--2e+0At2g26020PDF1.2b (plant defensin 1.2b)C.G.S.X.
0.026e-240TaAffx.65300.1.A1_atBJ251979--3e-1At5g56100glycine-rich protein / oleosinC.G.S.X.
0.026e-240Ta.3917.1.S1_s_atBJ255250--7e+0At4g05070unknown proteinC.G.S.X.
0.022e-138TaAffx.71044.1.S1_x_atAJ609951--4e+0At3g13227serine-rich protein-relatedC.G.S.X.
0.022e-138TaAffx.36832.1.S1_atBJ312654--1e-3At5g28630glycine-rich proteinC.G.S.X.
0.012e-138Ta.30790.1.S1_a_atCK195596--1e-1At1g12665-C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.284e-1583Arabidopsis thalianaAt2g20280816547zinc finger (CCCH-type) family proteinF:zinc ion binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MOFPVBA---C.G.S.X.
0.224e-1997Glycine maxGmaAffx.30088.1.S1_atAW734985--1e-54At2g20280zinc finger (CCCH-type) family proteinC.G.S.X.
0.9402533Hordeum vulgareContig10041_atContig10041--8e-29At2g20280zinc finger (CCCH-type) family proteinC.G.S.X.
0.612e-141504Oryza sativaOs01g0834700AK101559.1-The start codon is not identified.9e-10At2g20280zinc finger (CCCH-type) family proteinC.G.S.X.
0.254e-22107Populus trichocarpaPtpAffx.207661.1.S1_s_atpmrna15206hypothetical protein-4e-70At2g20280zinc finger (CCCH-type) family proteinC.G.S.X.
0.313e-25115Vitis vinifera1609200_atCF513119hypothetical protein LOC100263325-7e-49At2g20280zinc finger (CCCH-type) family proteinC.G.S.X.
0.562e-123442Zea maysZm.5544.1.A1_atAI746165nucleic acid binding protein-4e-43At2g20280zinc finger (CCCH-type) family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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