Gene omics information

Query gene ID	Ta.5909.3.A1_x_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	86.3	Ta.5909.3.A1_x_at	BJ298528	-	-	7e+0	At4g27350	unknown protein	S.X.	H.G.	Please select
0.67	86.3	TaAffx.76554.1.A1_at	BJ307578	-	-	1e+0	At5g54320	unknown protein	S.X.	H.G.	Please select
0.55	76.8	Ta.9217.1.S1_at	BT009612.1	-	-	1e-1	At2g22490	CYCD2	S.X.	H.G.	Please select
0.50	72.4	Ta.11311.1.A1_at	BQ169821	-	-	5e+0	At4g00940	Dof-type zinc finger domain-containing protein	S.X.	H.G.	Please select
0.43	62.2	TaAffx.13383.1.A1_at	BG904557	-	-	8e-1	At1g17800	plastocyanin-like domain-containing protein	S.X.	H.G.	Please select
0.38	54.7	Ta.7428.2.A1_a_at	CA736575	-	-	2e+0	At3g04780	-	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
10.1	99.2	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.2	97.5	GSM139920	Anther diplotene-anaphaseI rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.0	97.4	GSM139919	Anther diplotene-anaphaseI rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.7	97.1	GSM298094	Crown tissue of Solstice at 9 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
4.6	97.0	GSM139921	Anther diplotene-anaphaseI rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.3	96.7	GSM139930	Anther immature pollen rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.2	96.6	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.2	96.6	GSM139927	Anther tetrads rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.1	96.4	GSM324493	Si+ B+ rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
4.1	96.4	GSM324486	Si- B- rep3	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.81	4e-134	476	Ta.5909.2.S1_x_at	BJ298527	-	-	3e+0	At1g52340	ABA2 (ABA DEFICIENT 2)	C.G.	S.X.	Please select
0.55	9e-52	202	Ta.11216.1.A1_at	BQ169636	-	-	4e+0	At5g38090	unknown protein	C.G.	S.X.	Please select
0.56	9e-46	182	Ta.437.1.S1_at	BF478881	-	-	8e-1	At5g18690	AGP25 (ARABINOGALACTAN PROTEINS 25)	C.G.	S.X.	Please select
0.30	7e-28	123	Ta.8818.1.A1_at	BQ162452	-	-	1e+0	At2g20550	DNAJ chaperone C-terminal domain-containing protein	C.G.	S.X.	Please select
0.14	1e-20	99	Ta.6376.2.S1_x_at	BJ242801	-	-	3e-3	At3g16570	RALFL23 (ralf-like 23)	C.G.	S.X.	Please select
0.34	2e-19	95	Ta.2929.1.S1_a_at	BJ207489	-	-	1e+1	At5g53420	-	C.G.	S.X.	Please select
0.22	2e-19	95	Ta.2929.2.S1_at	BJ297951	-	-	7e+0	At4g00100	ATRPS13A (ARABIDOPSIS THALIANA RIBOSOMAL PROTEIN S13A)	C.G.	S.X.	Please select
0.32	6e-19	93	Ta.3511.1.S1_at	BJ220005	-	-	4e+0	At5g48860	unknown protein	C.G.	S.X.	Please select
0.39	3e-18	91	Ta.12466.1.A1_at	BQ172402	-	-	1e+0	At3g49845	-	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	7e+0	30	Arabidopsis thaliana	At4g27350	828843	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;BOPF	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.06	7e-1	34	Glycine max	GmaAffx.18019.2.S1_at	BE608251	-	-	4e+0	At5g10580	unknown protein	C.G.	S.X.	Please select
0.28	1e-15	81	Hordeum vulgare	Contig12742_at	Contig12742	-	-	2e+0	At4g10613	-	C.G.	S.X.	Please select
0.12	4e-3	42	Oryza sativa	Os03g0669100	AK063633.1	-	Deoxyuridine 5'-triphosphate nucleotidohydrolase(EC 3.6.1.23) (dUTPase) (dUTP pyrophosphatase) (P18)	4e-1	At5g62900	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	4e+1	28	Populus trichocarpa	PtpAffx.88470.1.A1_at	CV265364	-	-	8e-1	At1g60320	Toll-Interleukin-Resistance (TIR) domain-containing protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	9e+0	28	Vitis vinifera	1620805_at	CB344295	-	-	1e-21	Atcg00650	-	C.G.	S.X.	Please select
0.16	9e-10	61	Zea mays	Zm.2168.1.A1_at	BE638518	-	-	2e+0	At3g46940	deoxyuridine 5'-triphosphate nucleotidohydrolase family	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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