Gene omics information

Query gene ID Ta.5909.1.S1_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9899.9Ta.5909.1.S1_atBJ307101--3e-3At3g51290proline-rich family proteinS.X.H.G.
0.5173.0Ta.28022.2.A1_atBJ309684--1e-47At5g12250TUB6 (BETA-6 TUBULIN)S.X.H.G.
0.5072.4Ta.23801.1.S1_atCA704514--5e+0At1g65445transferase-relatedS.X.H.G.
0.5072.4Ta.27708.1.S1_atD37942.1protein H2B-6-3e-15At1g07790HTB1S.X.H.G.
0.4969.7Ta.28055.2.S1_x_atCA705590--3e-2At4g0081060S acidic ribosomal protein P1 (RPP1B)S.X.H.G.
0.4869.0Ta.1441.1.S1_atCD492052--3e+0Atcg00650-S.X.H.G.
0.4869.0Ta.4062.1.S1_x_atCA703978--2e-1At4g38420sks9 (SKU5 Similar 9)S.X.H.G.
0.4767.9Ta.3246.1.S1_atBQ168896--6e+0At4g25210transcription regulatorS.X.H.G.
0.4362.2Ta.9534.2.A1_a_atBJ307813--5e-6At3g15380choline transporter-relatedS.X.H.G.
0.4362.2Ta.11256.1.A1_atBQ169714--3e-2At1g32930galactosyltransferase family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
6.198.1GSM138144Genotype RL4452 developing seed at 5 days after anthesis, biological rep1 location SBGSE5937Wheat expression level polymorphism study parental genotypes 2 biological reps from SB location
6.098.0GSM138145Genotype RL4452 developing seed at 5 days after anthesis, biological rep3 location SBGSE5937Wheat expression level polymorphism study parental genotypes 2 biological reps from SB location
5.697.8GSM111232genotype H8 developing seed at 5 days after anthesis, biological rep1GSE4935wheat expression level polymorphism study 39 genotypes 2 biological reps
5.397.6GSM111233genotype H8 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological reps
5.297.5GSM138163genotype E5 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.997.3GSM138153genotype G32 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.296.6GSM138205genotype H8 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.996.1GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivars
3.896.0GSM111197genotype J15 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological reps
3.896.0GSM138162genotype E5 developing seed at 5 days after anthesis, biological rep1GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.102e-47190Ta.26924.1.S1_atCD454764--2e-10At2g20990SYTA (SYNAPTOTAGMIN A)C.G.S.X.
0.102e-28127Ta.5909.2.S1_x_atBJ298527--3e+0At1g52340ABA2 (ABA DEFICIENT 2)C.G.S.X.
0.083e-1583TaAffx.85439.1.S1_atCA620713--3e+0At2g29960CYP5 (CYCLOPHILIN 5)C.G.S.X.
0.022e-138Ta.17819.1.S1_atCA624578--1e-37At5g19780TUA5C.G.S.X.
0.032e-138Ta.13116.1.A1_atCD491415--2e+0At2g21385unknown proteinC.G.S.X.
0.036e-136TaAffx.107121.1.S1_s_atCA705756--3e+0At2g44360unknown proteinC.G.S.X.
0.036e-136Ta.3991.3.S1_atCA739769--4e-1At3g18518RTFL20 (ROTUNDIFOLIA LIKE 20)C.G.S.X.
0.026e-136Ta.28469.2.S1_a_atBJ305613--7e+0At2g44680CKB4 (CASEIN KINASE II BETA SUBUNIT 4)C.G.S.X.
0.026e-136Ta.1379.2.S1_atBG907121--2e-3At5g37200zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.053e-344Arabidopsis thalianaAt3g51290824292proline-rich family proteinF:unknown;P:N-terminal protein myristoylation;C:unknown;MPOBFVA---C.G.S.X.
0.029e-136Glycine maxGmaAffx.7932.2.S1_atBE211513--6e-2At2g42350zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.088e-45180Hordeum vulgareContig7799_atContig7799--5e-18At2g20990SYTA (SYNAPTOTAGMIN A)C.G.S.X.
0.393e-78293Oryza sativaOs09g05387009637.m03102-Protein of unknown function DUF630 domaincontaining protein1e-6At3g51290proline-rich family proteinC.G.S.X.
0.029e-756Populus trichocarpaPtpAffx.204304.1.S1_atpmrna8467plant synaptotagmin-6e-64At2g20990SYTA (SYNAPTOTAGMIN A)C.G.S.X.
0.045e-548Vitis vinifera1611946_s_atCF373318hypothetical protein LOC100260940-1e-1At5g04220SYTCC.G.S.X.
0.292e-48192Zea maysZm.5788.1.A1_atAI600957hypothetical protein LOC100280278-5e+0At5g55190RAN3 (RAN GTPASE 3)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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