Gene omics information

Query gene ID	Ta.5845.1.S1_x_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.50	72.4	Ta.5845.1.S1_x_at	CK153266	-	-	3e-13	At3g13510	unknown protein	S.X.	H.G.	Please select
0.80	92.2	Ta.6939.1.A1_at	CK169067	-	-	2e+0	At3g07590	small nuclear ribonucleoprotein D1, putative / snRNP core protein D1, putative / Sm protein D1, putative	S.X.	H.G.	Please select
0.73	89.1	Ta.5845.1.S1_at	CK153266	-	-	3e-13	At3g13510	unknown protein	S.X.	H.G.	Please select
0.60	81.0	Ta.5845.2.A1_x_at	CK208140	-	-	5e+0	Atmg01220	-	S.X.	H.G.	Please select
0.60	81.0	Ta.5845.2.A1_at	CK208140	-	-	5e+0	Atmg01220	-	S.X.	H.G.	Please select
0.23	29.0	Ta.21797.1.S1_at	CA702692	-	-	3e+0	Atmg00840	-	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
14.2	99.5	GSM314269	tissue type: immature inflorescence - rep1	GSE12508	Transcription patterns during wheat development
13.2	99.5	GSM314270	tissue type: immature inflorescence - rep2	GSE12508	Transcription patterns during wheat development
12.1	99.4	GSM314271	tissue type: immature inflorescence - rep3	GSE12508	Transcription patterns during wheat development
5.0	97.4	GSM314264	tissue type: seedling, crown - rep2	GSE12508	Transcription patterns during wheat development
4.5	96.9	GSM298073	Crown tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.5	96.9	GSM298075	Crown tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.3	96.7	GSM298074	Crown tissue of Paragon at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.1	96.4	GSM314265	tissue type: seedling, crown - rep3	GSE12508	Transcription patterns during wheat development
3.7	95.8	GSM314263	tissue type: seedling, crown - rep1	GSE12508	Transcription patterns during wheat development
3.6	95.6	GSM298061	Crown tissue of Harnesk at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.87	0	1408	Ta.5845.1.S1_at	CK153266	-	-	3e-13	At3g13510	unknown protein	C.G.	S.X.	Please select
0.34	2e-122	440	Ta.5845.2.A1_x_at	CK208140	-	-	5e+0	Atmg01220	-	C.G.	S.X.	Please select
0.34	2e-122	440	Ta.5845.2.A1_at	CK208140	-	-	5e+0	Atmg01220	-	C.G.	S.X.	Please select
0.29	2e-103	377	Ta.7595.1.A1_at	BJ261301	-	-	5e-4	At3g13510	unknown protein	C.G.	S.X.	Please select
0.29	1e-49	198	Ta.30520.1.S1_at	CA635767	-	-	8e-20	At1g55360	unknown protein	C.G.	S.X.	Please select
0.11	1e-12	75	TaAffx.93289.1.S1_at	BJ224797	-	-	7e-2	At5g18460	unknown protein	C.G.	S.X.	Please select
0.03	4e-3	44	TaAffx.516.1.S1_at	BQ802479	-	-	1e+0	At1g74050	60S ribosomal protein L6 (RPL6C)	C.G.	S.X.	Please select
0.02	4e-3	44	TaAffx.30805.1.S1_at	CA621908	-	-	7e+0	At4g33310	unknown protein	C.G.	S.X.	Please select
0.01	7e-2	40	Ta.9570.1.S1_at	BJ285050	-	-	1e-2	At1g17640	RNA recognition motif (RRM)-containing protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.13	3e-13	77	Arabidopsis thaliana	At3g13510	820553	unknown protein	F:unknown;P:biological_process unknown;C:endomembrane system;PFB	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.22	4e-13	77	Glycine max	Gma.2172.2.S1_a_at	BI426425	-	-	1e-145	At1g55360	unknown protein	C.G.	S.X.	Please select
0.71	0	1039	Hordeum vulgare	Contig5275_at	Contig5275	-	-	3e-22	At3g13510	unknown protein	C.G.	S.X.	Please select
0.40	5e-143	510	Oryza sativa	OsAffx.13549.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.15	6e-12	73	Populus trichocarpa	Ptp.6391.1.S1_s_at	CA934886	hypothetical protein	-	3e-65	At1g55360	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.06	2e-20	99	Vitis vinifera	1620804_at	CD797824	hypothetical protein LOC100267227	-	3e-114	At1g55360	unknown protein	C.G.	S.X.	Please select
0.34	2e-89	329	Zea mays	Zm.10376.1.S1_at	BQ538350	-	-	2e-11	At3g13510	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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