Gene omics information

Query gene ID Ta.5839.1.S1_x_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9498.9Ta.5839.1.S1_x_atBJ291864--9e-2At3g05675protein bindingS.X.H.G.
0.9599.1Ta.131.1.S1_atBE430809low-molecular-weight glutenin storage protein-7e-1At3g46613RTFL4 (ROTUNDIFOLIA LIKE 4)S.X.H.G.
0.9498.9Ta.24114.11.S1_x_atBJ237788Alpha/beta-gliadin precursor-3e+0At5g53590auxin-responsive family proteinS.X.H.G.
0.9498.9Ta.1257.2.A1_x_atBJ242255--7e-1At1g54830NF-YC3 (NUCLEAR FACTOR Y, SUBUNIT C3)S.X.H.G.
0.9398.7Ta.160.1.S1_x_atU86028.1pre-gamma-gliadin B-I-7e-1At5g62575unknown proteinS.X.H.G.
0.9398.7Ta.19.1.S1_atCD902219wheat type V thionin-2e+0At5g07600oleosin / glycine-rich proteinS.X.H.G.
0.9398.7Ta.24114.18.S1_x_atBJ239750--1e+0At5g10520RBK1 (Rop Binding protein Kinases 1)S.X.H.G.
0.9298.5Ta.23142.7.S1_x_atBQ244524--9e-3At5g61270PIF7 (PHYTOCHROME-INTERACTING FACTOR7)S.X.H.G.
0.9298.5Ta.24963.1.S1_x_atBJ241536HMW glutenin-1e+0At5g65790MYB68 (MYB DOMAIN PROTEIN 68)S.X.H.G.
0.9298.5Ta.24114.14.S1_x_atBJ241838Gamma-gliadin /// Gamma-gliadin-3e+0At3g20865AGP40 (arabinogalactan-protein 40)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
128.9100.0GSM314288tissue type: 22 DAP endosperm - rep2GSE12508Transcription patterns during wheat development
121.0100.0GSM314289tissue type: 22 DAP endosperm - rep3GSE12508Transcription patterns during wheat development
117.1100.0GSM314287tissue type: 22 DAP endosperm - rep1GSE12508Transcription patterns during wheat development
0.973.8GSM315202target strand labeled: Sense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription survey
0.030.7GSM314284tissue type: 22 DAP embryo - rep1GSE12508Transcription patterns during wheat development
0.030.7GSM314286tissue type: 22 DAP embryo - rep3GSE12508Transcription patterns during wheat development
0.030.7GSM314285tissue type: 22 DAP embryo - rep2GSE12508Transcription patterns during wheat development
0.030.7GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivars
0.030.7GSM298064Crown tissue of Harnesk at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
0.030.7GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.850690Ta.5839.1.S1_atBJ291864--9e-2At3g05675protein bindingC.G.S.X.
0.721e-81303Ta.6187.1.S1_x_atBQ167028--3e-1At5g04030unknown proteinC.G.S.X.
0.721e-81303Ta.6187.1.S1_atBQ167028--3e-1At5g04030unknown proteinC.G.S.X.
0.301e-56220TaAffx.106472.1.S1_atCA718330--4e+0At3g32896unknown proteinC.G.S.X.
0.321e-53210Ta.5839.2.S1_atCA710201--4e+0At4g05497F-box family proteinC.G.S.X.
0.162e-36153TaAffx.79390.1.S1_atCA716848--7e-1At5g28040transcription regulatorC.G.S.X.
0.252e-27123Ta.28983.1.S1_atCD453780--3e+1At5g23405high mobility group (HMG1/2) family proteinC.G.S.X.
0.172e-24113Ta.23397.1.S1_x_atBJ292777--3e-2At4g33660unknown proteinC.G.S.X.
0.145e-1685Ta.23397.2.S1_x_atCA718270--1e-1At2g21660CCR2 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.029e-238Arabidopsis thalianaAt3g05675819735protein bindingF:protein binding;P:unknown;C:unknown;P---C.G.S.X.
0.031e-138Glycine maxPsAffx.C118000036_atPsAffx.C118000036--1e-1At4g0081060S acidic ribosomal protein P1 (RPP1B)C.G.S.X.
0.269e-1993Hordeum vulgareContig946_atContig946--1e+0At3g63290unknown proteinC.G.S.X.
0.042e-138Oryza sativaOs11g01227009639.m00200--1e+1At4g29610cytidine deaminase, putative / cytidine aminohydrolase, putativeC.G.S.X.
0.042e+034Populus trichocarpaPtpAffx.88707.1.A1_atCV255964--2e+0At3g06080unknown proteinC.G.S.X.
0.034e-134Vitis vinifera1618440_s_atCD801284hypothetical protein LOC100256565-2e-2At5g15600SP1L4 (SPIRAL1-LIKE4)C.G.S.X.
0.033e+032Zea maysZm.6803.1.A1_a_atCA401942hypothetical protein LOC100273027-1e+0At5g08330TCP family transcription factor, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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