CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.5661.1.S1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.73 89.1 Ta.5661.1.S1_at BQ802737 - - 1e-16 At3g43240 ARID/BRIGHT DNA-binding domain-containing protein S.X. H.G.
0.50 72.4 Ta.12406.1.S1_at BQ166921 - - 3e+0 At5g25870 unknown protein S.X. H.G.
0.40 58.4 Ta.11254.1.S1_at BJ270844 - - 3e+0 At5g13450 ATP synthase delta chain, mitochondrial, putative / H(+)-transporting two-sector ATPase, delta (OSCP) subunit, putative S.X. H.G.
0.38 54.7 Ta.30926.1.S1_at CD895641 - - 1e-6 At1g50410 SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein S.X. H.G.
0.35 49.8 Ta.9387.1.S1_at BJ251341 - - 9e-23 At2g31510 IBR domain-containing protein / ARIADNE-like protein ARI7 (ARI7) S.X. H.G.
0.27 35.6 Ta.128.1.S1_at U76747.1 Tap - 5e+0 At5g46730 glycine-rich protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
5.2 97.5 GSM139928 Anther immature pollen rep1 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.1 96.4 GSM314276 tissue type: pistil, before anthesis - rep2 GSE12508 Transcription patterns during wheat development
3.8 96.0 GSM111187 genotype B68 developing seed at 5 days after anthesis, biological rep2 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
3.6 95.6 GSM314275 tissue type: pistil, before anthesis - rep1 GSE12508 Transcription patterns during wheat development
3.3 95.0 GSM314277 tissue type: pistil, before anthesis - rep3 GSE12508 Transcription patterns during wheat development
3.1 94.5 GSM314269 tissue type: immature inflorescence - rep1 GSE12508 Transcription patterns during wheat development
2.9 94.0 GSM314270 tissue type: immature inflorescence - rep2 GSE12508 Transcription patterns during wheat development
2.8 93.6 GSM139914 Anther pre-meiosis rep2 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.8 93.6 GSM314271 tissue type: immature inflorescence - rep3 GSE12508 Transcription patterns during wheat development
2.7 93.3 GSM314280 tissue type: anthers, before anthesis - rep3 GSE12508 Transcription patterns during wheat development
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e+0 34 TaAffx.58546.1.S1_at CA618678 - - 4e-3 At1g60690 aldo/keto reductase family protein C.G. S.X.
0.03 5e+0 32 TaAffx.78689.1.S1_at CA728963 - - 4e+0 At4g12510 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein C.G. S.X.
0.03 5e+0 32 TaAffx.113656.1.S1_at CA607407 - - 3e-1 At2g36255 - C.G. S.X.
0.01 5e+0 32 Ta.9583.1.S1_x_at CK156867 - - 2e-12 At3g13460 ECT2 C.G. S.X.
0.02 5e+0 32 Ta.6272.3.S1_at CA637710 - - 8e+0 At5g58580 ATL63 (ARABIDOPSIS TÓ C.G. S.X.
0.03 5e+0 32 Ta.3653.1.A1_at CD454215 - - 1e+0 At4g00895 ATP synthase delta chain-related C.G. S.X.
0.02 5e+0 32 Ta.27156.1.S1_at BT009507.1 - - 1e+0 At4g36720 HVA22K (HVA22-LIKE PROTEIN K) C.G. S.X.
0.02 2e+1 30 TaAffx.91578.1.A1_at BJ317826 - - 1e+0 At2g24480 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.03 2e+1 30 TaAffx.90006.1.S1_at BQ609953 - - 1e+0 At1g66235 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.14 1e-16 87 Arabidopsis thaliana At3g43240 823399 ARID/BRIGHT DNA-binding domain-containing protein F:protein binding, DNA binding, zinc ion binding;P:unknown;C:intracellular;PMFO - - - C.G. S.X.
0.17 8e-12 71 Glycine max Gma.15962.1.S1_at CD401274 - - 1e-38 At3g43240 ARID/BRIGHT DNA-binding domain-containing protein C.G. S.X.
0.72 0 952 Hordeum vulgare Contig9318_at Contig9318 - - 4e-26 At3g43240 ARID/BRIGHT DNA-binding domain-containing protein C.G. S.X.
0.52 2e-75 284 Oryza sativa Os09g0434000 AK062791.1 - FYVE/PHD zinc finger domain containing protein 9e-30 At3g43240 ARID/BRIGHT DNA-binding domain-containing protein C.G. S.X.
0.17 8e-12 71 Populus trichocarpa PtpAffx.8952.2.S1_at BU810871 hypothetical protein - 4e-57 At3g43240 ARID/BRIGHT DNA-binding domain-containing protein C.G. S.X.
0.03 2e+0 32 Vitis vinifera 1618691_at CF372335 - - 4e-3 At3g60800 zinc finger (DHHC type) family protein C.G. S.X.
0.21 1e-14 79 Zea mays Zm.13779.1.S1_at AY105342.1 hypothetical protein LOC100279908 - 3e-1 At2g36400 AtGRF3 (GROWTH-REGULATING FACTOR 3) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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