Gene omics information

Query gene ID Ta.5657.1.S1_x_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5072.4Ta.5657.1.S1_x_atCD452733--3e-9At5g58490cinnamoyl-CoA reductase familyS.X.H.G.
0.2329.0Ta.20364.1.S1_atCA679058--1e+1At4g03170DNA bindingS.X.H.G.
0.2227.1Ta.3057.1.S1_atBJ214808--3e+0At1g04800glycine-rich proteinS.X.H.G.
0.2125.5Ta.13694.1.S1_a_atCA614115--6e-1At5g07430pectinesterase family proteinS.X.H.G.
0.1011.3Ta.6113.1.S1_a_atCA668966--3e+0At5g22300NIT4 (NITRILASE 4)S.X.H.G.
0.056.7Ta.664.1.S1_atCK153186--1e-8At1g11910aspartyl protease family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
7.298.5GSM324489Si- B+ rep3GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
5.597.8GSM143510Thatcher_Lr34 (resistant), mock inoculated basal leaf, replication 3GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
5.397.6GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.697.0GSM143515Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
4.196.4GSM143509Thatcher_Lr34 (resistant), mock inoculated basal leaf, replication 2GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
4.196.4GSM138149genotype F29 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.795.8GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.595.4GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.495.2GSM143504Thatcher_Lr34 (resistant), rust inoculated basal leaf, replication 3GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
3.495.2GSM298089Leaf tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivars
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9802169Ta.5657.1.S1_atCD452733--3e-9At5g58490cinnamoyl-CoA reductase familyC.G.S.X.
0.387e-152537Ta.28385.2.S1_atCA616318--1e+0At5g48690-C.G.S.X.
0.331e-134480Ta.28385.1.S1_x_atCA661276--4e+0At2g34825RALFL20 (RALF-LIKE 20)C.G.S.X.
0.331e-134480Ta.28385.1.S1_atCA661276--4e+0At2g34825RALFL20 (RALF-LIKE 20)C.G.S.X.
0.331e-128460Ta.5657.2.S1_atCA664720--2e-5At5g58490cinnamoyl-CoA reductase familyC.G.S.X.
0.215e-85315Ta.941.2.S1_atCA735378--3e-1At4g00130-C.G.S.X.
0.272e-53210TaAffx.55189.2.S1_atCA669872--9e-1At2g37950zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.124e-42173TaAffx.55189.1.S1_atCA670451--2e+1At3g43580beta-galactosidaseC.G.S.X.
0.151e-20101Ta.15573.1.S1_atCA485537--4e+0At2g26695binding / zinc ion bindingC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.073e-963Arabidopsis thalianaAt5g58490835962cinnamoyl-CoA reductase familyF:3-beta-hydroxy-delta5-steroid dehydrogenase activity, binding, cinnamoyl-CoA reductase activity, catalytic activity;P:lignin biosynthetic process, steroid biosynthetic process, metabolic process;C:cellular_component unknown;BOPFMAV---C.G.S.X.
0.162e-1481Glycine maxGmaAffx.83755.1.S1_atCA784776--3e-14At5g58490cinnamoyl-CoA reductase familyC.G.S.X.
0.480700Hordeum vulgareContig14242_atContig14242--1e+0At5g42800DFR (DIHYDROFLAVONOL 4-REDUCTASE)C.G.S.X.
0.499e-88325Oryza sativaOs01g0828100CF326471-Conserved hypothetical protein2e-12At5g58490cinnamoyl-CoA reductase familyC.G.S.X.
0.022e-138Populus trichocarpaPtpAffx.221267.1.S1_atpmrna38027hypothetical protein-9e-1At3g48450nitrate-responsive NOI protein, putativeC.G.S.X.
0.108e-1373Vitis vinifera1621181_atCB921745hypothetical protein LOC100253488-7e-24At5g58490cinnamoyl-CoA reductase familyC.G.S.X.
0.098e-1167Zea maysZm.6706.1.A1_atCO517894hypothetical protein LOC100191263-6e-1At5g58490cinnamoyl-CoA reductase familyC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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