Gene omics information

Query gene ID Ta.5603.1.A1_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.2Ta.5603.1.A1_atBJ286068--7e-11At3g27020YSL6 (YELLOW STRIPE LIKE 6)S.X.H.G.
0.1011.3Ta.9414.3.A1_atBJ295505--4e+0At3g32920ATP binding / DNA binding / DNA-dependent ATPase/ nucleoside-triphosphatase/ nucleotide bindingS.X.H.G.
0.056.7Ta.28719.1.A1_atCA722261--1e+0At5g61890AP2 domain-containing transcription factor family proteinS.X.H.G.
0.056.7Ta.28221.1.A1_atCA665061--2e+1At4g13720inosine triphosphate pyrophosphatase, putative / HAM1 family proteinS.X.H.G.
0.034.7Ta.8613.1.A1_atBQ162128--1e+0At2g35700ERF38 (ERF FAMILY PROTEIN 38)S.X.H.G.
0.012.4TaAffx.37340.1.S1_atBJ284835--2e-6At3g27020YSL6 (YELLOW STRIPE LIKE 6)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
61.199.9GSM143492Jupateco_Lr34 (resistant), mock inoculated basal leaf, replication 3GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
8.898.9GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
8.398.8GSM143524Thatcher_Lr34 (susceptible), mock inoculated distal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
6.998.4GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.798.4GSM138210genotype B65 developing seed at 5 days after anthesis, biological rep1GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
6.598.3GSM143526Thatcher_Lr34 (susceptible), mock inoculated distal leaf, replication 3GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
6.498.2GSM250893TcLr34_3dpi_mock_rep2GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.398.2GSM143520Thatcher_Lr34 (susceptible), rust inoculated distal leaf, replication 3GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
6.398.2GSM246391SB62_Stem_ rep2_at anthesisGSE9767Genotypic differences in water soluble carbohydrate metabolism in stem
6.298.1GSM143494Jupateco_Lr34 (resistant), mock inoculated distal leaf, replication 2GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.792e-177621Ta.5463.1.A1_atBJ283707--1e-15At3g27020YSL6 (YELLOW STRIPE LIKE 6)C.G.S.X.
0.242e-63242Ta.29812.1.S1_atCA597557--2e-11At3g27020YSL6 (YELLOW STRIPE LIKE 6)C.G.S.X.
0.221e-1583TaAffx.109974.1.S1_atCA665874--3e+0At1g55780metal ion bindingC.G.S.X.
0.092e-550Ta.12410.1.A1_atCD935726--6e-3At1g65730YSL7 (YELLOW STRIPE LIKE 7)C.G.S.X.
0.033e-136TaAffx.119101.1.S1_atCA676921--4e+0At1g69320CLE10 (CLAVATA3/ESR-RELATED 10)C.G.S.X.
0.023e-136Ta.5556.1.S1_atCK200360--5e-17At4g38790ER lumen protein retaining receptor family proteinC.G.S.X.
0.033e-136Ta.23703.1.A1_atBJ321164--2e-3At2g21190ER lumen protein retaining receptor family proteinC.G.S.X.
0.034e+032TaAffx.78337.1.S1_atCA664653--1e+0At1g01640speckle-type POZ protein-relatedC.G.S.X.
0.034e+032TaAffx.107179.1.S1_atCA704854--8e-1At3g60760unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.077e-1167Arabidopsis thalianaAt3g27020822319YSL6 (YELLOW STRIPE LIKE 6)Arabidopsis thaliana metal-nicotianamine transporter YSL6---C.G.S.X.
0.091e-757Glycine maxGma.4128.1.S1_atBI968698--1e-42At3g27020YSL6 (YELLOW STRIPE LIKE 6)C.G.S.X.
0.495e-75280Hordeum vulgareContig16506_atContig16506--1e-13At3g27020YSL6 (YELLOW STRIPE LIKE 6)C.G.S.X.
0.222e-74280Oryza sativaOs04g0390500AK100148.1-Iron-phytosiderophore transporter protein yellowstripe 11e-21At3g27020YSL6 (YELLOW STRIPE LIKE 6)C.G.S.X.
0.091e-1067Populus trichocarpaPtp.5662.1.S1_s_atCA823147oligopeptide transporter OPT family-8e-33At3g27020YSL6 (YELLOW STRIPE LIKE 6)C.G.S.X.
0.051e-342Vitis vinifera1620492_atCA818735similar to YSL6 (YELLOW STRIPE LIKE 6); oligopeptide transporter-3e-23At3g27020YSL6 (YELLOW STRIPE LIKE 6)C.G.S.X.
0.204e-38157Zea maysZm.5546.1.A1_atBM079097hypothetical protein LOC100192483-1e-14At3g27020YSL6 (YELLOW STRIPE LIKE 6)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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