Gene omics information

Query gene ID	Ta.5522.2.S1_a_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.60	81.0	Ta.5522.2.S1_a_at	CA699425	-	-	1e+0	At2g13150	transcription factor	S.X.	H.G.	Please select
0.83	93.4	Ta.6666.2.S1_at	CA640317	-	-	5e-12	At3g49420	Got1-like family protein	S.X.	H.G.	Please select
0.67	86.3	Ta.6666.2.S1_x_at	CA640317	-	-	5e-12	At3g49420	Got1-like family protein	S.X.	H.G.	Please select
0.50	72.4	Ta.6666.3.S1_x_at	CA720211	-	-	4e-3	At3g03180	Got1-like family protein	S.X.	H.G.	Please select
0.46	66.8	TaAffx.96904.1.S1_at	BJ268172	-	-	1e+0	At5g14690	unknown protein	S.X.	H.G.	Please select
0.33	46.9	TaAffx.32308.1.S1_at	CA597142	-	-	1e+0	At2g19670	PRMT1A (PROTEIN ARGININE METHYLTRANSFERASE 1A)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
7.7	98.7	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.4	98.6	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.6	98.3	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.1	98.1	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.8	97.9	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.4	97.7	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.0	97.4	GSM314279	tissue type: anthers, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
4.2	96.6	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
4.1	96.4	GSM343678	Wheat var. Kennedy_control_rep1	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
4.0	96.3	GSM314280	tissue type: anthers, before anthesis - rep3	GSE12508	Transcription patterns during wheat development

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.99	0	1287	Ta.5522.2.S1_x_at	CA699425	-	-	1e+0	At2g13150	transcription factor	C.G.	S.X.	Please select
0.38	2e-172	605	Ta.5522.1.S1_at	CA705904	-	-	1e-5	At1g32400	TOM2A (TOBAMOVIRUS MULTIPLICATION 2A)	C.G.	S.X.	Please select
0.03	4e-1	36	TaAffx.85933.1.S1_at	CA618346	-	-	4e+0	At3g42310	unknown protein	C.G.	S.X.	Please select
0.03	4e-1	36	TaAffx.79853.1.S1_at	CA733543	-	-	1e+0	At1g04445	zinc finger (C2H2 type) family protein	C.G.	S.X.	Please select
0.03	4e-1	36	Ta.6574.1.S1_at	BJ284024	-	-	3e+0	At4g04632	ATP binding / protein kinase	C.G.	S.X.	Please select
0.03	1e+0	34	TaAffx.24133.1.S1_at	CA724674	-	-	1e+1	At5g56369	-	C.G.	S.X.	Please select
0.03	1e+0	34	TaAffx.114226.1.S1_at	BJ234930	-	-	1e+0	At3g21400	unknown protein	C.G.	S.X.	Please select
0.03	1e+0	34	TaAffx.105981.1.S1_x_at	CA727065	-	-	3e-1	At4g11870	unknown protein	C.G.	S.X.	Please select
0.03	1e+0	34	TaAffx.105981.1.S1_at	CA727065	-	-	3e-1	At4g11870	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	1e+0	34	Arabidopsis thaliana	At2g13150	815800	transcription factor	F:transcription factor activity;P:regulation of transcription, DNA-dependent;C:nucleus, chloroplast;PMOFBA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	2e+0	34	Glycine max	GmaAffx.77800.1.A1_at	BI967999	-	-	3e+0	At4g11870	unknown protein	C.G.	S.X.	Please select
0.46	3e-160	563	Hordeum vulgare	Contig4376_at	Contig4376	-	-	2e-3	At1g32400	TOM2A (TOBAMOVIRUS MULTIPLICATION 2A)	C.G.	S.X.	Please select
0.25	2e-65	250	Oryza sativa	Os08g0282000	AK101411.1	-	CD9/CD37/CD63 antigen family protein	3e-3	At1g32400	TOM2A (TOBAMOVIRUS MULTIPLICATION 2A)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	2e+0	34	Populus trichocarpa	PtpAffx.216552.1.S1_at	pmrna31399	hypothetical protein	-	1e+0	At3g24506	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	2e+0	32	Vitis vinifera	1606694_at	CB977917	hypothetical protein LOC100254974	-	1e+0	At4g14410	basic helix-loop-helix (bHLH) family protein	C.G.	S.X.	Please select
0.12	2e-44	178	Zea mays	Zm.8055.2.S1_at	BM378624	tetraspanin family protein	-	1e-2	At1g32400	TOM2A (TOBAMOVIRUS MULTIPLICATION 2A)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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