Gene omics information

Query gene ID Ta.5515.1.S1_at
Gene name Calcium-dependent protein kinase
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6786.3Ta.5515.1.S1_atCA681683Calcium-dependent protein kinase-4e-3At5g66210CPK28S.X.H.G.
0.4464.5Ta.5515.3.S1_atBJ245418calcium-dependent protein kinase-1e-2At4g36070CPK18S.X.H.G.
0.3142.7Ta.5515.1.S1_a_atCA681683calcium-dependent protein kinase-4e-3At5g66210CPK28S.X.H.G.
0.2125.5TaAffx.22993.1.S1_atCA741966--4e+0At2g02100LCR69 (LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 69)S.X.H.G.
0.2125.5Ta.9502.1.A1_s_atBJ310376--4e-1At4g18940cyclic phosphodiesterase, putativeS.X.H.G.
0.1112.4TaAffx.56499.1.S1_s_atCA650261--2e+1At5g66050-S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
13.099.4GSM314261tissue type: seedling, root - rep2GSE12508Transcription patterns during wheat development
8.898.9GSM314275tissue type: pistil, before anthesis - rep1GSE12508Transcription patterns during wheat development
7.998.7GSM298072Crown tissue of Paragon at 3 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
7.798.7GSM314265tissue type: seedling, crown - rep3GSE12508Transcription patterns during wheat development
6.898.4GSM314254tissue type: germinating seed, root - rep1GSE12508Transcription patterns during wheat development
6.898.4GSM314270tissue type: immature inflorescence - rep2GSE12508Transcription patterns during wheat development
6.498.2GSM314284tissue type: 22 DAP embryo - rep1GSE12508Transcription patterns during wheat development
6.298.1GSM314286tissue type: 22 DAP embryo - rep3GSE12508Transcription patterns during wheat development
6.298.1GSM314272tissue type: floral bracts, before anthesis - rep1GSE12508Transcription patterns during wheat development
5.998.0GSM314276tissue type: pistil, before anthesis - rep2GSE12508Transcription patterns during wheat development
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.0001063Ta.5515.1.S1_a_atCA681683calcium-dependent protein kinase-4e-3At5g66210CPK28C.G.S.X.
0.327e-79293Ta.5515.3.S1_atBJ245418calcium-dependent protein kinase-1e-2At4g36070CPK18C.G.S.X.
0.034e+032TaAffx.70061.25.S1_atCA604492--3e+0At5g44460calcium-binding protein, putativeC.G.S.X.
0.034e+032TaAffx.101428.1.S1_atCA697477--2e+1At5g53900unknown proteinC.G.S.X.
0.034e+032TaAffx.104424.1.S1_atCA696492--2e-1At1g19350BES1 (BRI1-EMS-SUPPRESSOR 1)C.G.S.X.
0.024e+032Ta.21842.1.S1_atCA704521--9e-3At5g21020-C.G.S.X.
0.034e+032Ta.13935.1.S1_atBQ744282--1e-3At3g44750HDA3 (HISTONE DEACETYLASE 3)C.G.S.X.
0.042e+130TaAffx.81787.1.S1_atCA645212--1e+0At5g05050peptidase C1A papain family proteinC.G.S.X.
0.042e+130TaAffx.81787.2.S1_s_atCA681857--5e+0At3g22961-C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.124e-342Arabidopsis thalianaAt5g66210836753CPK28member of Calcium Dependent Protein Kinase---C.G.S.X.
0.091e-757Glycine maxGma.17453.2.S1_atBU964441--6e-11At4g36070CPK18C.G.S.X.
0.371e-128458Hordeum vulgareContig18339_atContig18339--2e-3At5g66210CPK28C.G.S.X.
0.243e-101369Oryza sativaOs07g0409900AF194414.2-Protein kinase domain containing protein6e-33At2g17890CPK16C.G.S.X.
0.036e+032Populus trichocarpaPtpAffx.65895.1.S1_atDN502872hypothetical protein-7e-1At1g25250AtIDD16 (Arabidopsis thaliana Indeterminate(ID)-Domain 16)C.G.S.X.
0.033e-134Vitis vinifera1608382_atCF405318--4e+0At5g54215-C.G.S.X.
0.027e+030Zea maysZm.2066.1.A1_atCF054966ubiquitin family protein-2e+0At1g120101-aminocyclopropane-1-carboxylate oxidase, putative / ACC oxidase, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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