Gene omics information

Query gene ID Ta.5509.3.S1_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.2Ta.5509.3.S1_atCA604882--1e-2At1g1799012-oxophytodienoate reductase, putativeS.X.H.G.
0.034.7Ta.1991.1.S1_atBJ264076cold acclimation protein WCOR410c-8e-4At1g20440COR47 (COLD-REGULATED 47)S.X.H.G.
0.023.6Ta.3366.1.S1_atCK195723--2e-8At4g15560CLA1 (CLOROPLASTOS ALTERADOS 1)S.X.H.G.
0.023.6Ta.10572.1.S1_atBJ258058--4e+0At4g37240unknown proteinS.X.H.G.
0.023.6Ta.1058.2.S1_atBJ254771S-adenosylmethionine decarboxylase precursor-3e-5At3g02470SAMDC (S-ADENOSYLMETHIONINE DECARBOXYLASE)S.X.H.G.
0.012.4Ta.12751.1.S1_atCK208020--3e-10At5g49820emb1879 (embryo defective 1879)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
29.899.8GSM298068Leaf tissue of Paragon at 5 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
10.299.2GSM298080Leaf tissue of Solstice at 5 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
9.799.1GSM298079Leaf tissue of Solstice at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
9.699.1GSM143525Thatcher_Lr34 (susceptible), mock inoculated distal leaf, replication 2GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
8.999.0GSM111247genotype H10 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological reps
8.198.8GSM111236genotype F38b developing seed at 5 days after anthesis, biological rep1GSE4935wheat expression level polymorphism study 39 genotypes 2 biological reps
7.998.7GSM111223genotype H5 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological reps
6.798.4GSM111177genotype E5 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological reps
6.298.1GSM143497Jupateco_Lr34 (susceptible), mock inoculated basal leaf, replication 2GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
5.897.9GSM138184genotype C25 developing seed at 5 days after anthesis, biological rep1GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.000692Ta.5509.3.S1_x_atCA604882--1e-2At1g1799012-oxophytodienoate reductase, putativeC.G.S.X.
0.186e-85313Ta.5509.1.S1_atCA669976--1e-17At1g76690OPR2C.G.S.X.
0.174e-49194Ta.30735.1.S1_atCN009367--1e-17At1g76680OPR1C.G.S.X.
0.151e-36153Ta.9073.1.S1_atCD454241--6e-20At1g76690OPR2C.G.S.X.
0.137e-1477Ta.30735.2.S1_atCA604500--2e-5At1g76680OPR1C.G.S.X.
0.039e-134TaAffx.85585.1.S1_atCA621375--4e+0At4g13440calcium-binding EF hand family proteinC.G.S.X.
0.034e+032TaAffx.108163.1.S1_atCA691119--4e+0At4g38140zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.034e+032Ta.22049.1.S1_atCD909599--5e+0At5g5729060S acidic ribosomal protein P3 (RPP3B)C.G.S.X.
0.011e+130TaAffx.83813.1.S1_atCA650476--9e-10At5g55550RNA recognition motif (RRM)-containing proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.101e-240Arabidopsis thalianaAt1g1799083837912-oxophytodienoate reductase, putativeF:unknown;P:unknown;C:unknown;BOFPAM---C.G.S.X.
0.215e-1271Glycine maxGmaAffx.67883.1.S1_atBG046605--1e-15At1g76690OPR2C.G.S.X.
0.181e-75282Hordeum vulgareContig5146_atContig5146--4e-21At1g76690OPR2C.G.S.X.
0.101e-41171Oryza sativaOs.15627.1.A1_at---0C.G.S.X.
0.183e-756Populus trichocarpaPtpAffx.221339.1.S1_atpmrna38168hypothetical protein-2e-22At1g76680OPR1C.G.S.X.
0.044e+030Vitis vinifera1612603_atCD802337--2e+0At3g57850-C.G.S.X.
0.151e-34145Zea maysZm.7548.1.A1_atBM07890312-oxo-phytodienoic acid reductase5-5e-11At1g76690OPR2C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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