Gene omics information

Query gene ID	Ta.5430.1.S1_a_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.73	89.1	Ta.5430.1.S1_a_at	CD889822	-	-	5e-5	At4g00750	dehydration-responsive family protein	S.X.	H.G.	Please select
0.83	93.4	Ta.5430.2.S1_x_at	CA742740	-	-	3e-1	At3g07590	small nuclear ribonucleoprotein D1, putative / snRNP core protein D1, putative / Sm protein D1, putative	S.X.	H.G.	Please select
0.67	86.3	Ta.16044.1.S1_at	CA595910	-	-	3e+0	At3g16570	RALFL23 (ralf-like 23)	S.X.	H.G.	Please select
0.67	86.3	Ta.5430.2.S1_at	CA742740	-	-	3e-1	At3g07590	small nuclear ribonucleoprotein D1, putative / snRNP core protein D1, putative / Sm protein D1, putative	S.X.	H.G.	Please select
0.23	29.0	Ta.7871.3.S1_at	CA636480	-	-	7e-1	At1g70470	unknown protein	S.X.	H.G.	Please select
0.17	19.8	TaAffx.4083.1.S1_at	CA599327	-	-	8e-5	At2g14720	VSR-2	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
19.7	99.7	GSM139927	Anther tetrads rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
18.8	99.7	GSM139925	Anther tetrads rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.4	96.8	GSM138160	genotype A91 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.2	96.6	GSM139924	Anther telophaseI-telophaseII rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.7	95.8	GSM138156	genotype DH91 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.6	95.6	GSM139922	Anther telophaseI-telophaseII rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.6	95.6	GSM138199	genotype C22 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.2	94.8	GSM138152	genotype G32 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.2	94.8	GSM139923	Anther telophaseI-telophaseII rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.1	94.5	GSM138194	genotype J15 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.36	3e-114	412	Ta.5430.2.S1_x_at	CA742740	-	-	3e-1	At3g07590	small nuclear ribonucleoprotein D1, putative / snRNP core protein D1, putative / Sm protein D1, putative	C.G.	S.X.	Please select
0.36	3e-114	412	Ta.5430.2.S1_at	CA742740	-	-	3e-1	At3g07590	small nuclear ribonucleoprotein D1, putative / snRNP core protein D1, putative / Sm protein D1, putative	C.G.	S.X.	Please select
0.43	1e-86	321	TaAffx.16144.1.S1_at	CD492111	-	-	6e-4	At4g00750	dehydration-responsive family protein	C.G.	S.X.	Please select
0.19	5e-39	163	Ta.22002.1.S1_at	CA714257	-	-	2e+0	At5g52270	vesicle transport protein-related	C.G.	S.X.	Please select
0.06	2e-4	48	Ta.4185.2.S1_at	BJ260400	-	-	3e-4	At4g10440	dehydration-responsive family protein	C.G.	S.X.	Please select
0.06	9e-4	46	Ta.4185.1.A1_at	BJ272995	-	-	9e-8	At1g26850	dehydration-responsive family protein	C.G.	S.X.	Please select
0.02	1e-2	42	Ta.4387.1.S1_at	CK212172	-	-	1e-2	At1g31850	dehydration-responsive protein, putative	C.G.	S.X.	Please select
0.03	5e-2	40	TaAffx.9851.1.S1_at	BJ314167	Dehydration-induced protein	-	8e-19	At1g33170	dehydration-responsive family protein	C.G.	S.X.	Please select
0.03	5e-2	40	TaAffx.9851.1.S1_s_at	BJ314167	Dehydration-induced protein	-	8e-19	At1g33170	dehydration-responsive family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	5e-5	50	Arabidopsis thaliana	At4g00750	825923	dehydration-responsive family protein	F:unknown;P:biological_process unknown;C:Golgi apparatus;PBO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.02	3e-1	38	Glycine max	Gma.5841.2.S1_s_at	CD403513	-	-	1e-22	At1g23290	RPL27AB	C.G.	S.X.	Please select
0.65	0	1723	Hordeum vulgare	Contig4811_at	Contig4811	-	-	5e-3	At2g45750	dehydration-responsive family protein	C.G.	S.X.	Please select
0.39	0	868	Oryza sativa	Os04g0570800	AK099906.1	-	Putative methyltransferase DUF248 family protein	1e-4	At4g00750	dehydration-responsive family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	1e-3	46	Populus trichocarpa	PtpAffx.211498.1.S1_s_at	pmrna22534	hypothetical protein	-	1e-15	At2g45750	dehydration-responsive family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.05	2e-7	56	Vitis vinifera	1607184_at	CB981964	hypothetical protein LOC100258938	-	8e-24	At4g00750	dehydration-responsive family protein	C.G.	S.X.	Please select
0.53	0	688	Zea mays	Zm.1344.1.A1_at	CA402844	-	-	9e-7	At4g00750	dehydration-responsive family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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