Gene omics information

Query gene ID	Ta.5185.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.2	Ta.5185.1.S1_at	BJ278198	-	-	1e+0	At3g18590	plastocyanin-like domain-containing protein	S.X.	H.G.	Please select
0.46	66.8	TaAffx.105893.1.S1_x_at	CA728292	-	-	3e-1	At1g74890	ARR15 (RESPONSE REGULATOR 15)	S.X.	H.G.	Please select
0.44	64.5	Ta.5023.2.A1_at	BJ311223	-	-	1e+0	At5g05090	myb family transcription factor	S.X.	H.G.	Please select
0.30	40.9	TaAffx.105893.1.S1_at	CA728292	-	-	3e-1	At1g74890	ARR15 (RESPONSE REGULATOR 15)	S.X.	H.G.	Please select
0.16	18.2	TaAffx.38217.1.S1_at	BJ244494	-	-	7e+0	At5g11690	ATTIM17-3	S.X.	H.G.	Please select
0.01	2.4	Ta.3911.2.S1_s_at	CA604151	-	-	4e+0	At2g44290	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein (YLS3)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
17.6	99.7	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
17.6	99.7	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
14.0	99.5	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
12.2	99.4	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
11.5	99.3	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
9.8	99.1	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
9.0	99.0	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.0	98.5	GSM250894	TcLr34_3dpi_inoculated_rep2	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.8	97.9	GSM143501	Jupateco_Lr34 (susceptible), mock inoculated distal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
5.5	97.8	GSM324490	Si+ B- rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.32	5e-68	258	Ta.12361.1.A1_at	BQ172188	-	-	6e-1	At3g12100	cation efflux family protein / metal tolerance protein, putative	C.G.	S.X.	Please select
0.44	7e-55	214	TaAffx.29184.1.S1_s_at	CA648571	-	-	5e-1	At4g15393	CYP702A5	C.G.	S.X.	Please select
0.48	2e-30	133	TaAffx.121618.3.S1_at	BG905468	-	-	8e-1	At3g18590	plastocyanin-like domain-containing protein	C.G.	S.X.	Please select
0.06	1e-4	48	Ta.25243.1.A1_at	CD452574	-	-	1e-1	At5g01180	PTR5 (PEPTIDE TRANSPORTER 5)	C.G.	S.X.	Please select
0.04	4e-4	46	Ta.7160.3.S1_at	BJ313002	-	-	1e-2	At3g26580	-	C.G.	S.X.	Please select
0.05	1e-3	44	TaAffx.51096.1.S1_at	CA731122	-	-	1e+0	At3g01410	RNase H domain-containing protein	C.G.	S.X.	Please select
0.06	6e-3	42	TaAffx.92293.1.S1_at	BJ269856	-	-	7e-2	At5g19370	rhodanese-like domain-containing protein / PPIC-type PPIASE domain-containing protein	C.G.	S.X.	Please select
0.08	6e-3	42	TaAffx.65445.1.S1_at	BJ246063	-	-	3e-1	At5g19090	heavy-metal-associated domain-containing protein	C.G.	S.X.	Please select
0.05	2e-2	40	TaAffx.82985.1.S1_at	CA663888	-	-	9e-1	At5g65220	ribosomal protein L29 family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	1e+0	34	Arabidopsis thaliana	At3g18590	821390	plastocyanin-like domain-containing protein	F:electron carrier activity, copper ion binding;P:unknown;C:anchored to membrane;PO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	2e+0	34	Glycine max	PsAffx.psZG005xN22f_s_at	PsAffx.psZG005xN22f	-	-	9e+0	At5g14602	unknown protein	C.G.	S.X.	Please select
0.03	7e-1	34	Hordeum vulgare	rbaal22m07_at	rbaal22m07	-	-	2e-1	At1g06440	ubiquitin thiolesterase	C.G.	S.X.	Please select
0.04	2e-1	38	Oryza sativa	Os10g0170000	AK121907.1	-	Nucleotide-sensitive chloride conductanceregulator family protein	2e+0	At5g25890	IAA28 (INDOLE-3-ACETIC ACID INDUCIBLE 28)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	2e+0	34	Populus trichocarpa	PtpAffx.218409.1.S1_at	pmrna34014	hypothetical protein	-	5e-1	At4g33410	signal peptide peptidase family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	1e-1	36	Vitis vinifera	1622413_at	CD714494	-	-	3e-1	At4g39070	zinc finger (B-box type) family protein	C.G.	S.X.	Please select
0.04	6e-1	34	Zea mays	ZmAffx.72.1.A1_at	AI665181	-	-	2e-1	At4g39580	kelch repeat-containing F-box family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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