Gene omics information

Query gene ID	Ta.5149.1.A1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.61	82.0	Ta.5149.1.A1_at	CK213896	-	-	3e-1	At1g07690	unknown protein	S.X.	H.G.	Please select
0.53	74.9	TaAffx.132281.2.S1_at	CK212051	-	-	6e+0	At1g70700	TIFY7	S.X.	H.G.	Please select
0.50	72.4	Ta.7716.1.S1_at	BJ322896	-	-	4e-1	At1g12665	-	S.X.	H.G.	Please select
0.50	72.4	Ta.7389.2.A1_x_at	CK215961	-	-	3e-1	At3g02670	proline-rich family protein	S.X.	H.G.	Please select
0.50	72.4	TaAffx.132281.2.S1_x_at	CK212051	-	-	6e+0	At1g70700	TIFY7	S.X.	H.G.	Please select
0.40	58.4	TaAffx.63970.1.A1_at	CK163758	-	-	6e+0	At5g62500	ATEB1B (END BINDING PROTEIN 1B)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
78.9	100.0	GSM143521	Thatcher_Lr34 (susceptible), mock inoculated basal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
46.4	99.9	GSM314267	tissue type: seedling, leaf - rep2	GSE12508	Transcription patterns during wheat development
22.3	99.8	GSM138154	genotype H5 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
20.3	99.7	GSM138188	genotype F38a developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
15.8	99.6	GSM138169	genotype B68 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
14.9	99.5	GSM138215	genotype A77 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
11.2	99.3	GSM143508	Thatcher_Lr34 (resistant), mock inoculated basal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
10.4	99.2	GSM138200	genotype F48 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
9.5	99.1	GSM111178	genotype DH95 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
9.4	99.1	GSM143523	Thatcher_Lr34 (susceptible), mock inoculated basal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.34	4e-50	198	Ta.17299.1.S1_at	CA619453	-	-	4e+0	At1g72920	disease resistance protein (TIR-NBS class), putative	C.G.	S.X.	Please select
0.56	2e-46	186	TaAffx.132281.2.S1_x_at	CK212051	-	-	6e+0	At1g70700	TIFY7	C.G.	S.X.	Please select
0.56	2e-46	186	TaAffx.132281.2.S1_at	CK212051	-	-	6e+0	At1g70700	TIFY7	C.G.	S.X.	Please select
0.10	2e-9	63	TaAffx.52888.1.S1_at	CA699377	-	-	4e+0	At5g57500	transferase, transferring glycosyl groups	C.G.	S.X.	Please select
0.04	4e-1	36	Ta.30507.1.S1_a_at	CK214499	-	-	2e+0	At5g35230	unknown protein	C.G.	S.X.	Please select
0.04	4e-1	36	Ta.30507.1.S1_x_at	CK214499	-	-	2e+0	At5g35230	unknown protein	C.G.	S.X.	Please select
0.04	4e-1	36	Ta.30507.1.S1_at	CK214499	-	-	2e+0	At5g35230	unknown protein	C.G.	S.X.	Please select
0.05	4e-1	36	Ta.2429.3.S1_x_at	CA629200	-	-	5e+0	At1g27530	-	C.G.	S.X.	Please select
0.01	4e-1	36	Ta.239.1.S1_at	CD930094	eukaryotic initiation factor 4B	-	7e-2	At3g26400	EIF4B1	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	3e-1	36	Arabidopsis thaliana	At1g07690	837282	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PF	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	8e+0	32	Glycine max	PsAffx.psMY009iF08r_s_at	PsAffx.psMY009iF08r	-	-	2e+0	At4g17085	unknown protein	C.G.	S.X.	Please select
0.74	1e-82	305	Hordeum vulgare	Contig4815_at	Contig4815	-	-	1e+0	At5g24318	catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds	C.G.	S.X.	Please select
0.17	8e-10	65	Oryza sativa	Os10g0391400	AK107854.1	-	ZIM domain containing protein	2e+0	At3g01700	AGP11	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	2e+0	34	Populus trichocarpa	PtpAffx.148864.1.S1_at	BI128735	hypothetical protein	-	4e-37	At2g46090	diacylglycerol kinase family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	3e+1	28	Vitis vinifera	1622474_at	CF373640	-	-	3e+0	At1g54445	-	C.G.	S.X.	Please select
0.03	2e+0	32	Zea mays	Zm.4860.2.A1_at	AI770577	-	-	3e+0	At2g34140	Dof-type zinc finger domain-containing protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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