CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.5132.1.S1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.60 81.0 Ta.5132.1.S1_at BJ277319 - - 7e-2 At3g10405 unknown protein S.X. H.G.
0.36 51.9 TaAffx.70436.1.A1_at CD492161 - - 6e-3 At2g22810 ACS4 (1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 4) S.X. H.G.
0.15 17.1 TaAffx.106268.1.S1_at CA720964 - - 4e+0 At2g33130 RALFL18 (ralf-like 18) S.X. H.G.
0.01 2.4 Ta.7268.1.A1_at BJ278275 - - 5e+0 At2g45403 unknown protein S.X. H.G.
0.01 2.4 Ta.3083.2.A1_at BJ254365 - - 4e+0 At3g05602 unknown protein S.X. H.G.
0.01 2.4 Ta.5681.1.S1_x_at CA605111 - - 1e-4 At2g41420 proline-rich family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
14.9 99.5 GSM138153 genotype G32 developing seed at 5 days after anthesis, biological rep3 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
13.4 99.5 GSM298092 Crown tissue of Solstice at 3 weeks post germination GSE11774 Expression data from cold treated wheat cultivars
12.6 99.4 GSM298070 Leaf tissue of Paragon at 9 weeks post germination, biological rep 2 GSE11774 Expression data from cold treated wheat cultivars
8.6 98.9 GSM111233 genotype H8 developing seed at 5 days after anthesis, biological rep2 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
7.1 98.5 GSM138203 genotype F44 developing seed at 5 days after anthesis, biological rep3 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
6.6 98.3 GSM138188 genotype F38a developing seed at 5 days after anthesis, biological rep1 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
6.5 98.3 GSM138162 genotype E5 developing seed at 5 days after anthesis, biological rep1 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
6.2 98.1 GSM298089 Leaf tissue of Solstice at 3 weeks post germination GSE11774 Expression data from cold treated wheat cultivars
6.1 98.1 GSM138154 genotype H5 developing seed at 5 days after anthesis, biological rep1 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
6.0 98.0 GSM138178 genotype A88 developing seed at 5 days after anthesis, biological rep1 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.47 1e-145 515 Ta.18809.1.S1_at CA643902 - - 5e-4 At1g01100 60S acidic ribosomal protein P1 (RPP1A) C.G. S.X.
0.59 3e-112 404 TaAffx.84372.1.S1_at CA654239 - - 3e-4 At1g01100 60S acidic ribosomal protein P1 (RPP1A) C.G. S.X.
0.47 9e-94 343 Ta.18809.2.S1_at CA642390 - - 3e-4 At1g01100 60S acidic ribosomal protein P1 (RPP1A) C.G. S.X.
0.47 9e-94 343 Ta.18809.2.S1_x_at CA642390 - - 3e-4 At1g01100 60S acidic ribosomal protein P1 (RPP1A) C.G. S.X.
0.50 6e-92 337 TaAffx.84372.2.S1_at CA638376 - - 3e-3 At1g01100 60S acidic ribosomal protein P1 (RPP1A) C.G. S.X.
0.30 3e-32 139 Ta.30769.1.S1_at CN010035 - - 3e-1 At5g64667 IDL2 (INFLORESCENCE DEFICIENT IN ABSCISSION (IDA)-LIKE 2) C.G. S.X.
0.32 6e-21 101 TaAffx.113464.1.S1_s_at CA611857 - - 2e-1 At2g33400 unknown protein C.G. S.X.
0.10 1e-9 63 TaAffx.128418.142.S1_at BJ278689 - - 4e+0 At5g62360 invertase/pectin methylesterase inhibitor family protein C.G. S.X.
0.01 5e-3 42 Ta.2583.1.S1_x_at BJ253017 - - 2e-12 At3g06860 MFP2 (MULTIFUNCTIONAL PROTEIN 2) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 7e-2 38 Arabidopsis thaliana At3g10405 820204 unknown protein F:molecular_function unknown;P:pollen development;C:chloroplast;PB - - - C.G. S.X.
0.04 4e-1 36 Glycine max GmaAffx.65716.1.A1_x_at CA853286 - - 5e-5 At5g35190 proline-rich extensin-like family protein C.G. S.X.
0.04 5e-1 34 Hordeum vulgare HVSMEa0014P20r2_x_at HVSMEa0014P20r2 - - 1e+1 At5g13790 AGL15 (AGAMOUS-LIKE 15) C.G. S.X.
0.30 3e-21 103 Oryza sativa Os04g0469200 9632.m03729 - Heavy metal transport/detoxification proteindomain containing protein 9e-1 At4g29260 acid phosphatase class B family protein C.G. S.X.
0.03 4e-1 36 Populus trichocarpa Ptp.3609.1.S1_at DN502750 hypothetical protein - 5e-6 At1g05960 binding C.G. S.X.
0.03 2e-2 38 Vitis vinifera 1622232_at CK138167.1 - - 2e-27 At5g19855 unknown protein C.G. S.X.
0.03 1e-1 36 Zea mays Zm.9890.1.A1_at BM347924 XBAT32 - 5e+0 At2g32300 UCC1 (UCLACYANIN 1) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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