Gene omics information

Query gene ID	Ta.5109.1.S1_a_at
Gene name	Plasma membrane H+-ATPase subunit H
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.2	Ta.5109.1.S1_a_at	CA713571	Plasma membrane H+-ATPase subunit H	-	5e-3	At4g26710	ATP synthase subunit H family protein	S.X.	H.G.	Please select
0.40	58.4	Ta.6591.2.S1_at	CK193094	-	-	1e-5	At2g33470	GLTP1 (glycolipid transfer protein 1)	S.X.	H.G.	Please select
0.40	58.4	Ta.6591.2.S1_x_at	CK193094	-	-	1e-5	At2g33470	GLTP1 (glycolipid transfer protein 1)	S.X.	H.G.	Please select
0.10	11.3	Ta.297.1.S1_at	BJ241999	-	-	3e+0	At5g19510	elongation factor 1B alpha-subunit 2 (eEF1Balpha2)	S.X.	H.G.	Please select
0.03	4.7	Ta.5522.1.S1_at	CA705904	-	-	1e-5	At1g32400	TOM2A (TOBAMOVIRUS MULTIPLICATION 2A)	S.X.	H.G.	Please select
0.03	4.7	Ta.2228.1.S1_a_at	U48692.1	calmodulin TaCaM2-2 /// calmodulin TaCaM2-3 /// calmodulin TaCaM2-1	-	5e-103	At3g56800	CAM3 (CALMODULIN 3)	S.X.	H.G.	Please select

Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
6.7	98.4	GSM138170	genotype C31 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
6.3	98.2	GSM138199	genotype C22 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
6.1	98.1	GSM250905	TcLr34_7dpi_mock_rep1	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.0	98.0	GSM314260	tissue type: seedling, root - rep1	GSE12508	Transcription patterns during wheat development
5.7	97.9	GSM111187	genotype B68 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
5.5	97.8	GSM314261	tissue type: seedling, root - rep2	GSE12508	Transcription patterns during wheat development
5.3	97.6	GSM138152	genotype G32 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
5.0	97.4	GSM250903	TcLr1_7dpi_mock_rep1	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.0	97.4	GSM314272	tissue type: floral bracts, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
4.8	97.2	GSM138213	genotype C10 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location

Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.60	5e-133	474	Ta.28311.2.S1_x_at	CA630222	Plasma membrane H+-ATPase subunit H	-	6e-5	At4g26710	ATP synthase subunit H family protein	C.G.	S.X.	Please select
0.54	7e-126	450	Ta.5109.3.S1_at	CA697843	Plasma membrane H+-ATPase subunit H	-	9e-6	At4g26710	ATP synthase subunit H family protein	C.G.	S.X.	Please select
0.07	2e-8	59	Ta.29487.1.S1_x_at	CD867755	-	-	1e+0	At1g12900	GAPA-2 (GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE A SUBUNIT 2)	C.G.	S.X.	Please select
0.10	4e-7	56	Ta.2550.3.S1_at	CA646799	-	-	2e+1	At5g46873	-	C.G.	S.X.	Please select
0.03	9e-2	38	TaAffx.105803.1.S1_at	CA729603	-	-	7e-2	At1g12810	proline-rich family protein	C.G.	S.X.	Please select
0.01	9e-2	38	Ta.8671.1.S1_at	CA616421	-	-	3e-1	At1g64840	F-box family protein	C.G.	S.X.	Please select
0.03	4e-1	36	TaAffx.128533.1.S1_at	CA691498	-	-	2e+0	At1g43850	SEU (seuss)	C.G.	S.X.	Please select
0.03	4e-1	36	TaAffx.119557.1.S1_at	BJ268308	-	-	7e-2	At1g09920	TRAF-type zinc finger-related	C.G.	S.X.	Please select
0.03	4e-1	36	Ta.28003.2.S1_a_at	BJ321671	-	-	4e+0	At4g39675	unknown protein	C.G.	S.X.	Please select

Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.08	5e-3	42	Arabidopsis thaliana	At4g26710	828778	ATP synthase subunit H family protein	F:hydrogen ion transmembrane transporter activity;P:ATP hydrolysis coupled proton transport;C:vacuole;MPOF	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	2e+0	34	Glycine max	GmaAffx.54392.1.S1_at	BG352873	-	-	6e-14	At1g78770	cell division cycle family protein	C.G.	S.X.	Please select
0.70	2e-152	537	Hordeum vulgare	Contig6470_at	Contig6470	-	-	1e-3	At5g55290	ATP synthase subunit H family protein	C.G.	S.X.	Please select
0.36	1e-45	184	Oryza sativa	Os04g0660600	AK120899.1	-	ATP synthase subunit H family protein	3e-10	At5g55290	ATP synthase subunit H family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.05	5e-4	46	Populus trichocarpa	Ptp.6175.2.S1_at	CV246158	hypothetical protein	-	3e-17	At5g55290	ATP synthase subunit H family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.09	6e-3	40	Vitis vinifera	1612654_at	CA809225	hypothetical protein LOC100256926	-	3e-19	At5g55290	ATP synthase subunit H family protein	C.G.	S.X.	Please select
0.24	5e-32	137	Zea mays	Zm.1052.1.A1_at	BM334713	-	-	2e+0	At5g53610	glycosyl hydrolase family protein 17	C.G.	S.X.	Please select

Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage