Gene omics information

Query gene ID	Ta.5100.2.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.90	94.8	Ta.5100.2.S1_at	BJ272656	-	-	5e-34	At5g09590	MTHSC70-2 (MITOCHONDRIAL HSP70 2)	S.X.	H.G.	Please select
0.50	72.4	Ta.2502.2.A1_x_at	CD865828	HSP80-2	-	3e-57	At5g56010	HSP81-3	S.X.	H.G.	Please select
0.49	69.7	Ta.18.1.S1_at	BJ241578	-	-	2e-113	At1g54270	EIF4A-2	S.X.	H.G.	Please select
0.46	66.8	Ta.27713.1.A1_x_at	CD879558	elongation factor-1 alpha	-	0	At1g07920	elongation factor 1-alpha / EF-1-alpha	S.X.	H.G.	Please select
0.45	65.2	Ta.2739.3.S1_x_at	BJ298795	Ribosomal protein L19	-	5e-44	At3g16780	60S ribosomal protein L19 (RPL19B)	S.X.	H.G.	Please select
0.43	62.2	Ta.2502.3.A1_x_at	BJ306224	HSP80-2	-	4e-75	At5g56010	HSP81-3	S.X.	H.G.	Please select
0.43	62.2	Ta.7610.1.S1_a_at	CD889532	-	-	1e-6	At5g11560	catalytic	S.X.	H.G.	Please select
0.43	62.2	Ta.27713.2.A1_x_at	CD910422	Elongation factor-1 alpha	-	0	At1g07920	elongation factor 1-alpha / EF-1-alpha	S.X.	H.G.	Please select
0.41	59.6	Ta.659.1.S1_x_at	BI751166	Translation elongation factor 1 alpha-subunit	-	0	At1g07920	elongation factor 1-alpha / EF-1-alpha	S.X.	H.G.	Please select
0.40	58.4	Ta.2207.1.S1_at	CK200975	-	-	2e-56	At5g05780	RPN8A (RP NON-ATPASE SUBUNIT 8A)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
2.9	94.0	GSM111219	genotype F29 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
2.6	92.9	GSM298084	Crown tissue of Solstice at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
2.4	92.0	GSM298083	Crown tissue of Solstice at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
2.4	92.0	GSM111247	genotype H10 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
2.3	91.5	GSM298085	Crown tissue of Solstice at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
2.3	91.5	GSM111197	genotype J15 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
2.3	91.5	GSM111232	genotype H8 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
2.3	91.5	GSM111225	genotype A81 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
2.3	91.5	GSM139918	Anther leptotene-pachytene rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.3	91.5	GSM111235	genotype F44 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.33	6e-49	196	Ta.24154.1.S1_x_at	CD452459	-	-	2e-27	At5g09590	MTHSC70-2 (MITOCHONDRIAL HSP70 2)	C.G.	S.X.	Please select
0.33	6e-49	196	Ta.24154.1.S1_s_at	CD452459	-	-	2e-27	At5g09590	MTHSC70-2 (MITOCHONDRIAL HSP70 2)	C.G.	S.X.	Please select
0.20	2e-46	188	TaAffx.93351.1.A1_at	BJ215394	-	-	4e-1	At4g32208	-	C.G.	S.X.	Please select
0.12	1e-16	89	TaAffx.93351.2.S1_at	CA595893	-	-	3e-1	At4g32208	-	C.G.	S.X.	Please select
0.04	2e-9	65	Ta.23807.6.A1_x_at	CK212414	-	-	1e-175	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	C.G.	S.X.	Please select
0.04	2e-9	65	Ta.23807.6.A1_at	CK212414	-	-	1e-175	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	C.G.	S.X.	Please select
0.04	4e-7	57	Ta.23807.4.S1_x_at	BJ311158	-	-	0	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	C.G.	S.X.	Please select
0.04	4e-7	57	Ta.23807.4.S1_s_at	BJ311158	-	-	0	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	C.G.	S.X.	Please select
0.05	2e-5	52	Ta.21335.1.S1_a_at	BJ321089	-	-	0	At5g42020	BIP2	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.44	5e-34	147	Arabidopsis thaliana	At5g09590	830818	MTHSC70-2 (MITOCHONDRIAL HSP70 2)	heat shock protein 70 (Hsc70-5); nuclear	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.34	2e-65	252	Glycine max	GmaAffx.64203.1.S1_at	BI942376	-	-	3e-92	At5g09590	MTHSC70-2 (MITOCHONDRIAL HSP70 2)	C.G.	S.X.	Please select
0.35	1e-122	440	Hordeum vulgare	Contig3536_s_at	Contig3536	-	-	5e-3	At4g32208	-	C.G.	S.X.	Please select
0.66	0	1883	Oryza sativa	Os03g0113700	AK103835.1	-	Heat shock 70 kDa protein, mitochondrial precursor	2e-61	At4g37910	mtHsc70-1 (mitochondrial heat shock protein 70-1)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.50	7e-114	412	Populus trichocarpa	PtpAffx.204771.1.S1_at	pmrna9394	hypothetical protein	-	2e-171	At5g09590	MTHSC70-2 (MITOCHONDRIAL HSP70 2)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.18	3e-20	99	Vitis vinifera	1618085_at	CF372334	similar to Heat shock 70 kDa protein, mitochondrial	-	4e-23	At5g09590	MTHSC70-2 (MITOCHONDRIAL HSP70 2)	C.G.	S.X.	Please select
0.58	0	658	Zea mays	Zm.700.1.A1_at	CA403882	heat shock 70 kDa protein	-	2e-54	At5g09590	MTHSC70-2 (MITOCHONDRIAL HSP70 2)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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