CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.497.3.S1_x_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.81 92.4 Ta.497.3.S1_x_at CA722566 - - 7e-8 At3g23660 transport protein, putative S.X. H.G.
0.61 82.0 Ta.3478.3.S1_x_at CA637826 - - 2e-11 At1g69670 CUL3B (CULLIN 3B) S.X. H.G.
0.58 79.2 Ta.3083.2.A1_at BJ254365 - - 4e+0 At3g05602 unknown protein S.X. H.G.
0.57 79.2 TaAffx.34241.2.S1_x_at CA722326 - - 4e+0 At5g51960 - S.X. H.G.
0.56 78.6 TaAffx.58161.1.S1_at CA621887 - - 3e+0 At5g67070 RALFL34 (ralf-like 34) S.X. H.G.
0.55 76.8 Ta.14305.1.A1_at BU099616 - - 2e+0 At2g20260 PSAE-2 (photosystem I subunit E-2) S.X. H.G.
0.53 74.9 TaAffx.34241.2.S1_at CA722326 - - 4e+0 At5g51960 - S.X. H.G.
0.51 73.0 TaAffx.38268.1.A1_at BJ242361 - - 1e+0 At1g21326 VQ motif-containing protein S.X. H.G.
0.50 72.4 Ta.5681.1.S1_x_at CA605111 - - 1e-4 At2g41420 proline-rich family protein S.X. H.G.
0.50 72.4 Ta.14479.3.S1_x_at CA630294 - - 7e-18 At2g05830 eukaryotic translation initiation factor 2B family protein / eIF-2B family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
16.6 99.6 GSM298070 Leaf tissue of Paragon at 9 weeks post germination, biological rep 2 GSE11774 Expression data from cold treated wheat cultivars
8.3 98.8 GSM298092 Crown tissue of Solstice at 3 weeks post germination GSE11774 Expression data from cold treated wheat cultivars
6.7 98.4 GSM298090 Leaf tissue of Solstice at 5 weeks post germination GSE11774 Expression data from cold treated wheat cultivars
6.2 98.1 GSM250898 TcLr1_3dpi_inoculated_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.1 97.5 GSM138162 genotype E5 developing seed at 5 days after anthesis, biological rep1 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.9 97.3 GSM298067 Leaf tissue of Paragon at 5 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
4.8 97.2 GSM138205 genotype H8 developing seed at 5 days after anthesis, biological rep3 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.1 96.4 GSM298089 Leaf tissue of Solstice at 3 weeks post germination GSE11774 Expression data from cold treated wheat cultivars
3.8 96.0 GSM138190 genotype D39 developing seed at 5 days after anthesis, biological rep1 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.4 95.2 GSM250897 TcLr1_3dpi_mock_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.87 0 912 Ta.497.3.S1_at CA722566 - - 7e-8 At3g23660 transport protein, putative C.G. S.X.
0.20 4e-170 597 Ta.497.1.S1_x_at CK156533 - - 1e-13 At3g23660 transport protein, putative C.G. S.X.
0.52 3e-109 395 Ta.28724.1.A1_x_at CA722351 - - 2e+1 At3g52630 - C.G. S.X.
0.32 3e-69 262 Ta.26662.1.A1_a_at CD491499 - - 3e-17 At4g14160 transport protein, putative C.G. S.X.
0.32 3e-69 262 Ta.26662.1.A1_at CD491499 - - 3e-17 At4g14160 transport protein, putative C.G. S.X.
0.34 6e-64 244 Ta.26662.2.A1_x_at CA624367 - - 2e-5 At1g05520 transport protein, putative C.G. S.X.
0.07 8e-8 57 TaAffx.86386.1.S1_at CA609728 - - 5e-6 At3g23660 transport protein, putative C.G. S.X.
0.10 2e-5 50 Ta.497.2.S1_a_at CA635451 - - 1e-7 At4g14160 transport protein, putative C.G. S.X.
0.10 2e-5 50 Ta.497.2.S1_x_at CA635451 - - 1e-7 At4g14160 transport protein, putative C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 7e-8 57 Arabidopsis thaliana At3g23660 821946 transport protein, putative F:protein binding, transporter activity, zinc ion binding;P:intracellular protein transport, transport, ER to Golgi vesicle-mediated transport;C:COPII vesicle coat;MFOP - - - C.G. S.X.
0.07 3e-11 69 Glycine max Gma.17594.3.S1_at CA785007 - - 2e-12 At3g23660 transport protein, putative C.G. S.X.
0.28 1e-97 355 Hordeum vulgare Contig4761_at Contig4761 - - 2e-8 At1g05520 transport protein, putative C.G. S.X.
0.12 5e-66 252 Oryza sativa Os11g0433500 AK067849.1 - Protein transport protein Sec23A (SEC23-relatedprotein A) 1e-9 At4g14160 transport protein, putative C.G. S.X.
0.05 2e-6 54 Populus trichocarpa Ptp.5961.1.S1_at CV280435 hypothetical protein - 6e-63 At3g23660 transport protein, putative C.G. S.X.
0.07 5e-3 40 Vitis vinifera 1615265_at CF514099 hypothetical protein LOC100262252 - 2e-5 At4g14160 transport protein, putative C.G. S.X.
0.14 6e-65 246 Zea mays Zm.813.2.A1_at AY103619.1 - - 5e-15 At4g14160 transport protein, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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