CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.4941.1.S1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.44 64.5 Ta.4941.1.S1_at BT009077.1 - - 5e-4 At5g66110 metal ion binding S.X. H.G.
0.50 72.4 Ta.8032.2.A1_x_at BQ161154 - - 1e+1 At5g28610 - S.X. H.G.
0.27 35.6 Ta.18908.1.A1_at CA643885 - - 5e+0 At3g01327 - S.X. H.G.
0.13 14.6 TaAffx.119163.1.A1_at BJ285786 - - 4e+0 At2g05400 meprin and TRAF homology domain-containing protein / MATH domain-containing protein S.X. H.G.
0.13 14.6 Ta.8032.1.S1_at BJ252787 - - 8e+0 At4g39330 CAD9 (CINNAMYL ALCOHOL DEHYDROGENASE 9) S.X. H.G.
0.06 7.6 Ta.9398.1.S1_a_at CD452606 - - 6e-20 At1g30330 ARF6 (AUXIN RESPONSE FACTOR 6) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
29.4 99.8 GSM314272 tissue type: floral bracts, before anthesis - rep1 GSE12508 Transcription patterns during wheat development
23.3 99.8 GSM314274 tissue type: floral bracts, before anthesis - rep3 GSE12508 Transcription patterns during wheat development
21.8 99.8 GSM314276 tissue type: pistil, before anthesis - rep2 GSE12508 Transcription patterns during wheat development
21.5 99.7 GSM314273 tissue type: floral bracts, before anthesis - rep2 GSE12508 Transcription patterns during wheat development
21.4 99.7 GSM314275 tissue type: pistil, before anthesis - rep1 GSE12508 Transcription patterns during wheat development
20.2 99.7 GSM314277 tissue type: pistil, before anthesis - rep3 GSE12508 Transcription patterns during wheat development
15.1 99.6 GSM298075 Crown tissue of Paragon at 9 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
15.0 99.6 GSM298064 Crown tissue of Harnesk at 9 weeks post germination, biological rep 2 GSE11774 Expression data from cold treated wheat cultivars
14.9 99.5 GSM298063 Crown tissue of Harnesk at 9 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
14.2 99.5 GSM298076 Crown tissue of Paragon at 9 weeks post germination, biological rep 2 GSE11774 Expression data from cold treated wheat cultivars
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.16 4e-26 119 Ta.14269.1.A1_at BQ842799 - - 2e-2 At5g66110 metal ion binding C.G. S.X.
0.16 9e-12 71 Ta.27970.1.A1_at CD921955 - - 9e-1 At5g66110 metal ion binding C.G. S.X.
0.04 9e-9 61 TaAffx.40.1.S1_at AJ615341 - - 8e-5 At1g22990 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related C.G. S.X.
0.04 2e-6 54 Ta.9697.1.S1_s_at BJ242494 - - 1e-3 At1g22990 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related C.G. S.X.
0.03 2e-6 54 Ta.7699.1.S1_at BJ277130 - - 4e-2 At1g22990 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related C.G. S.X.
0.03 2e-6 54 Ta.7699.1.S1_x_at BJ277130 - - 4e-2 At1g22990 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related C.G. S.X.
0.03 3e-5 50 Ta.3726.1.S1_at CA654945 - - 2e+0 At5g66110 metal ion binding C.G. S.X.
0.06 1e-4 48 Ta.28292.2.S1_s_at BJ253295 - - 1e-3 At1g22990 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related C.G. S.X.
0.04 1e-4 48 Ta.1107.1.A1_at BE416288 - - 5e-3 At1g22990 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.11 5e-4 46 Arabidopsis thaliana At5g66110 836743 metal ion binding F:metal ion binding;P:metal ion transport;C:plasma membrane;PFM - - - C.G. S.X.
0.13 3e-3 44 Glycine max Gma.175.1.S1_s_at AW397631 GMFP7 - 5e-16 At5g66110 metal ion binding C.G. S.X.
0.33 7e-51 200 Hordeum vulgare Contig11751_at Contig11751 - - 1e-4 At4g38580 ATFP6 (FARNESYLATED PROTEIN 6) C.G. S.X.
0.42 1e-114 414 Oryza sativa Os04g0244800 AK121488.1 - Heavy metal transport/detoxification proteindomain containing protein 5e-10 At4g38580 ATFP6 (FARNESYLATED PROTEIN 6) C.G. S.X.
0.07 7e-1 36 Populus trichocarpa PtpAffx.3173.9.S1_at CV262060 hypothetical protein - 2e-2 At4g35060 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related C.G. S.X.
0.07 2e-13 75 Vitis vinifera 1608337_at BQ792532 hypothetical protein LOC100260571 - 2e-15 At5g66110 metal ion binding C.G. S.X.
0.38 2e-97 355 Zea mays Zm.10202.1.A1_at AY112463.1 farnesylated protein 1 - 3e-8 At5g66110 metal ion binding C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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