Gene omics information

Query gene ID	Ta.4798.1.S1_at
Gene name	Vacuolar proton ATPase subunit H
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.36	51.9	Ta.4798.1.S1_at	CK163023	Vacuolar proton ATPase subunit H	-	2e-8	At3g42050	vacuolar ATP synthase subunit H family protein	S.X.	H.G.	Please select
0.67	86.3	Ta.3311.1.S1_at	BJ274103	root hair defective 3 GTP-binding protein	-	1e-28	At1g72960	root hair defective 3 GTP-binding (RHD3) family protein	S.X.	H.G.	Please select
0.57	79.2	Ta.2839.1.S1_at	CD876245	-	-	8e-4	At4g00026	-	S.X.	H.G.	Please select
0.50	72.4	Ta.7299.1.S1_at	CK162098	-	-	6e-36	At3g59920	ATGDI2 (RAB GDP DISSOCIATION INHIBITOR 2)	S.X.	H.G.	Please select
0.50	72.4	Ta.14353.1.S1_at	BU100478	-	-	5e-4	At5g52200	unknown protein	S.X.	H.G.	Please select
0.44	64.5	Ta.28673.1.S1_at	BJ286336	Vacuolar ATPase subunit F	-	3e-15	At4g02620	vacuolar ATPase subunit F family protein	S.X.	H.G.	Please select
0.43	62.2	Ta.13231.1.S1_at	BJ286554	vacuolar proton ATPase subunit E	-	7e-35	At4g11150	TUF (VACUOLAR ATP SYNTHASE SUBUNIT E1)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
2.4	92.0	GSM314273	tissue type: floral bracts, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
2.3	91.5	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
2.3	91.5	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.3	91.5	GSM314261	tissue type: seedling, root - rep2	GSE12508	Transcription patterns during wheat development
2.2	91.0	GSM314256	tissue type: germinating seed, root - rep3	GSE12508	Transcription patterns during wheat development
2.1	90.3	GSM143516	Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 2	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
2.1	90.3	GSM314272	tissue type: floral bracts, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
2.1	90.3	GSM343682	Wheat var. Kennedy_control_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
2.1	90.3	GSM343687	Wheat var. Kennedy_Fp inoculated_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
2.1	90.3	GSM250902	Tc_7dpi_inoculated_rep1	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.30	0	676	Ta.4798.3.S1_a_at	CA601924	vacuolar proton ATPase subunit H	-	4e+0	At1g27420	kelch repeat-containing F-box family protein	C.G.	S.X.	Please select
0.19	5e-49	196	Ta.15539.1.S1_at	CA486682	-	-	4e-3	At3g42050	vacuolar ATP synthase subunit H family protein	C.G.	S.X.	Please select
0.02	1e-3	46	TaAffx.77471.1.A1_at	CA747375	-	-	2e-2	At1g29195	unknown protein	C.G.	S.X.	Please select
0.02	1e-3	46	TaAffx.77554.1.S1_at	CA746122	-	-	8e+0	At5g67490	unknown protein	C.G.	S.X.	Please select
0.02	1e-3	46	TaAffx.7104.1.S1_x_at	CA668402	-	-	3e+0	At5g36659	-	C.G.	S.X.	Please select
0.02	1e-3	46	TaAffx.7104.1.S1_at	CA668402	-	-	3e+0	At5g36659	-	C.G.	S.X.	Please select
0.02	1e-3	46	TaAffx.50109.1.S1_at	CA745818	-	-	3e+0	At2g36100	integral membrane family protein	C.G.	S.X.	Please select
0.02	1e-3	46	TaAffx.50058.1.S1_at	CA746479	-	-	2e+0	At5g05598	-	C.G.	S.X.	Please select
0.02	1e-3	46	TaAffx.4254.1.S1_at	CA747018	-	-	3e+0	At4g36040	DNAJ heat shock N-terminal domain-containing protein (J11)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.14	2e-8	61	Arabidopsis thaliana	At3g42050	823170	vacuolar ATP synthase subunit H family protein	F:binding, hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances, proton-transporting ATPase activity, rotational mechanism;P:ATP synthesis coupled proton transport;C:vacuolar membrane, chloroplast, plasma membrane, vacuole, plant-type vacuole;MFOP	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.20	8e-24	113	Glycine max	Gma.5705.1.S1_at	CD405659	-	-	1e-43	At3g42050	vacuolar ATP synthase subunit H family protein	C.G.	S.X.	Please select
0.84	0	2682	Hordeum vulgare	Contig3655_at	Contig3655	-	-	3e-16	At3g42050	vacuolar ATP synthase subunit H family protein	C.G.	S.X.	Please select
0.64	0	1247	Oryza sativa	Os07g0549700	AK104331.1	-	ARM repeat fold domain containing protein	1e-12	At3g42050	vacuolar ATP synthase subunit H family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.17	6e-9	63	Populus trichocarpa	PtpAffx.212182.1.S1_at	pmrna23881	hypothetical protein	-	7e-35	At3g42050	vacuolar ATP synthase subunit H family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.13	3e-10	65	Vitis vinifera	1609434_at	CF211782	hypothetical protein LOC100240790	-	1e-41	At3g42050	vacuolar ATP synthase subunit H family protein	C.G.	S.X.	Please select
0.60	0	928	Zea mays	Zm.3986.1.A1_at	AY108648.1	vacuolar ATPase subunit H protein	-	4e-9	At3g42050	vacuolar ATP synthase subunit H family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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