CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.4770.1.S1_x_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.53 74.9 Ta.4770.1.S1_x_at CK162188 - - 4e-1 At2g28105 - S.X. H.G.
0.36 51.9 Ta.13180.2.S1_x_at BJ263702 - - 2e-5 At5g20165 unknown protein S.X. H.G.
0.30 40.9 Ta.5537.1.S1_at CD890152 - - 2e-43 At5g20570 RBX1 (RING-BOX 1) S.X. H.G.
0.29 39.2 Ta.1087.1.S1_s_at CK169309 - - 3e-5 At3g25220 FKBP15-1 S.X. H.G.
0.24 30.3 Ta.21083.2.S1_at CA685996 - - 5e-8 At4g40100 ABA-responsive protein-related S.X. H.G.
0.24 30.3 Ta.822.2.S1_x_at CD901100 - - 1e-90 At4g40040 histone H3.2 S.X. H.G.
0.18 21.0 Ta.16344.1.S1_at CK212005 - - 3e-1 At2g39320 OTU-like cysteine protease family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
3.1 94.5 GSM314270 tissue type: immature inflorescence - rep2 GSE12508 Transcription patterns during wheat development
3.1 94.5 GSM314269 tissue type: immature inflorescence - rep1 GSE12508 Transcription patterns during wheat development
3.0 94.3 GSM111204 genotype B10 developing seed at 5 days after anthesis, biological rep1 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
3.0 94.3 GSM138205 genotype H8 developing seed at 5 days after anthesis, biological rep3 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.0 94.3 GSM139914 Anther pre-meiosis rep2 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.8 93.6 GSM139920 Anther diplotene-anaphaseI rep2 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.8 93.6 GSM138171 genotype C31 developing seed at 5 days after anthesis, biological rep3 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.7 93.3 GSM139919 Anther diplotene-anaphaseI rep1 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.7 93.3 GSM139922 Anther telophaseI-telophaseII rep1 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.6 92.9 GSM139921 Anther diplotene-anaphaseI rep3 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.47 3e-128 458 Ta.4770.2.S1_a_at CA708111 - - 4e+0 At1g70960 F-box family protein C.G. S.X.
0.47 3e-128 458 Ta.4770.2.S1_x_at CA708111 - - 4e+0 At1g70960 F-box family protein C.G. S.X.
0.09 2e-15 83 TaAffx.52938.1.S1_s_at CA655777 - - 2e+1 At3g23930 unknown protein C.G. S.X.
0.03 3e-8 59 Ta.28393.2.S1_at CK195651 - - 2e-27 At3g20050 ATTCP-1 C.G. S.X.
0.03 3e-8 59 Ta.28393.2.S1_x_at CK195651 - - 2e-27 At3g20050 ATTCP-1 C.G. S.X.
0.03 3e-2 40 TaAffx.67574.1.S1_at BJ305895 - - 3e-1 At3g23610 dual specificity protein phosphatase (DsPTP1) C.G. S.X.
0.03 1e-1 38 Ta.7120.1.S1_at BJ315729 - - 1e+0 At1g69930 ATGSTU11 (GLUTATHIONE S-TRANSFERASE TAU 11) C.G. S.X.
0.04 1e-1 38 Ta.15848.1.S1_at CA498563 - - 2e+0 At3g42790 AL3 (ALFIN-LIKE 3) C.G. S.X.
0.02 4e-1 36 TaAffx.99087.1.S1_at CA719152 - - 2e-13 At5g23300 PYRD (pyrimidine d) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 4e-1 36 Arabidopsis thaliana At2g28105 817356 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM - - - C.G. S.X.
0.03 6e-1 36 Glycine max GmaAffx.19737.1.S1_at AW705178 - - 2e+0 At2g20495 - C.G. S.X.
0.58 2e-167 587 Hordeum vulgare Contig8283_at Contig8283 - - 3e-1 At2g28105 - C.G. S.X.
0.35 7e-63 242 Oryza sativa OsAffx.17722.1.S1_s_at - - - 0 C.G. S.X.
0.03 2e+0 34 Populus trichocarpa PtpAffx.212255.1.S1_at pmrna24021 hypothetical protein - 2e-10 At5g16650 DNAJ heat shock N-terminal domain-containing protein C.G. S.X.
0.03 5e-1 34 Vitis vinifera 1617342_at CF605608 hypothetical protein LOC100250363 - 2e-8 At4g27000 ATRBP45C C.G. S.X.
0.27 1e-60 232 Zea mays Zm.15443.1.S1_at CD484762 hypothetical protein LOC100276706 - 1e-3 At3g54085 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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