CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.4745.1.S1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.70 87.2 Ta.4745.1.S1_at BJ270947 - - 3e+0 At5g59860 RNA recognition motif (RRM)-containing protein S.X. H.G.
0.80 92.2 Ta.25205.1.A1_at CD454715 - - 3e-1 At5g10430 AGP4 (ARABINOGALACTAN PROTEIN 4) S.X. H.G.
0.74 89.4 Ta.3768.1.A1_at BJ253616 - - 1e-1 At1g03020 glutaredoxin family protein S.X. H.G.
0.74 89.4 Ta.28843.1.A1_at BQ169554 - - 3e+0 At5g63460 SAP domain-containing protein S.X. H.G.
0.71 88.0 Ta.6399.1.A1_at BJ263740 - - 5e+0 At5g49490 AGL83 (AGAMOUS-LIKE 83) S.X. H.G.
0.61 82.0 TaAffx.118768.1.A1_at BJ310103 - - 1e+0 At5g09225 unknown protein S.X. H.G.
0.56 78.6 Ta.6440.1.A1_at BJ311244 - - 1e+0 At4g09860 unknown protein S.X. H.G.
0.55 76.8 Ta.26985.1.S1_at CD454201 - - 6e+0 At5g53200 TRY (TRIPTYCHON) S.X. H.G.
0.40 58.4 Ta.12263.1.A1_at BQ171969 - - 3e+0 At3g30725 AtGDU6 (Arabidopsis thaliana GLUTAMINE DUMPER 6) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
31.2 99.9 GSM139925 Anther tetrads rep1 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
29.1 99.8 GSM139927 Anther tetrads rep3 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
23.9 99.8 GSM139914 Anther pre-meiosis rep2 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
23.3 99.8 GSM139928 Anther immature pollen rep1 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
21.2 99.7 GSM139920 Anther diplotene-anaphaseI rep2 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
20.2 99.7 GSM139930 Anther immature pollen rep3 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
18.5 99.7 GSM139923 Anther telophaseI-telophaseII rep2 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
18.1 99.7 GSM139926 Anther tetrads rep2 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
17.5 99.7 GSM139919 Anther diplotene-anaphaseI rep1 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
16.1 99.6 GSM139922 Anther telophaseI-telophaseII rep1 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 8e-1 34 TaAffx.110972.1.S1_at CA650559 - - 9e+0 At5g60630 unknown protein C.G. S.X.
0.02 8e-1 34 Ta.9307.1.S1_a_at CA641835 - - 9e-10 At4g13360 catalytic C.G. S.X.
0.03 8e-1 34 Ta.9307.2.A1_a_at CD453370 - - 5e-7 At3g24360 enoyl-CoA hydratase/isomerase family protein C.G. S.X.
0.03 8e-1 34 Ta.9307.2.A1_x_at CD453370 - - 5e-7 At3g24360 enoyl-CoA hydratase/isomerase family protein C.G. S.X.
0.03 8e-1 34 Ta.9307.3.S1_x_at CK216138 - - 3e-7 At4g13360 catalytic C.G. S.X.
0.04 3e+0 32 TaAffx.6524.1.S1_at CA683937 - - 9e-1 At2g19680 mitochondrial ATP synthase g subunit family protein C.G. S.X.
0.04 3e+0 32 TaAffx.29373.1.S1_s_at CA644125 - - 1e+1 At4g09530 auxin-responsive family protein C.G. S.X.
0.04 3e+0 32 TaAffx.29373.1.S1_at CA644125 - - 1e+1 At4g09530 auxin-responsive family protein C.G. S.X.
0.03 3e+0 32 TaAffx.128624.3.S1_at CA647266 - - 3e-7 At1g29150 ATS9 (ARABIDOPSIS NON-ATPASE SUBUNIT 9) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 3e+0 32 Arabidopsis thaliana At5g59860 836108 RNA recognition motif (RRM)-containing protein F:RNA binding, nucleotide binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MPFOBA - - - C.G. S.X.
0.05 3e-1 36 Glycine max GmaAffx.50791.1.S1_at BM092484 - - 3e+0 At2g35500 shikimate kinase-related C.G. S.X.
0.04 2e+0 32 Hordeum vulgare EBma08_SQ003_L11_at EBma08_SQ003_L11 - - 3e+0 At3g55920 peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative C.G. S.X.
0.04 6e+0 32 Oryza sativa Os04g0391700 9629.m02439 - - 9e-1 At3g57950 unknown protein C.G. S.X.
0.04 4e+0 32 Populus trichocarpa PtpAffx.49709.1.A1_at CV274000 - - 1e+1 At5g32450 RNA recognition motif (RRM)-containing protein C.G. S.X.
0.04 4e+0 30 Vitis vinifera 1616548_at CD006761 - - 8e-5 At3g04260 PTAC3 (PLASTID TRANSCRIPTIONALLY ACTIVE3) C.G. S.X.
0.04 5e+0 30 Zea mays ZmAffx.1076.1.A1_at AI948113 hypothetical protein LOC100279228 - 3e+0 At4g36900 RAP2.10 (related to AP2 10) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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