Gene omics information

Query gene ID	Ta.4702.3.S1_x_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.83	93.4	Ta.4702.3.S1_x_at	BJ267470	-	-	2e+0	At5g62220	exostosin family protein	S.X.	H.G.	Please select
0.61	82.0	Ta.4702.1.S1_x_at	CA728616	-	-	2e+0	At5g49820	emb1879 (embryo defective 1879)	S.X.	H.G.	Please select
0.59	79.8	Ta.14522.2.S1_a_at	BJ275827	-	-	5e-12	At3g16170	acyl-activating enzyme 13 (AAE13)	S.X.	H.G.	Please select
0.50	72.4	Ta.14522.2.S1_x_at	BJ275827	-	-	5e-12	At3g16170	acyl-activating enzyme 13 (AAE13)	S.X.	H.G.	Please select
0.48	69.0	Ta.4702.1.S1_a_at	CA728616	-	-	2e+0	At5g49820	emb1879 (embryo defective 1879)	S.X.	H.G.	Please select
0.46	66.8	Ta.14522.3.A1_x_at	CK157446	-	-	2e-3	At3g16170	acyl-activating enzyme 13 (AAE13)	S.X.	H.G.	Please select
0.44	64.5	TaAffx.128607.1.S1_at	BJ315374	-	-	3e-2	At1g69700	ATHVA22C	S.X.	H.G.	Please select
0.40	58.4	Ta.25244.1.S1_at	CK170803	-	-	7e-1	At1g23140	C2 domain-containing protein	S.X.	H.G.	Please select
0.36	51.9	TaAffx.4083.1.S1_at	CA599327	-	-	8e-5	At2g14720	VSR-2	S.X.	H.G.	Please select
0.30	40.9	Ta.4501.1.S1_at	CD886215	-	-	2e-6	At2g14720	VSR-2	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
24.3	99.8	GSM139930	Anther immature pollen rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
16.1	99.6	GSM139926	Anther tetrads rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
14.9	99.5	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
11.3	99.3	GSM314286	tissue type: 22 DAP embryo - rep3	GSE12508	Transcription patterns during wheat development
7.4	98.6	GSM111175	genotype G30 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
7.3	98.6	GSM314284	tissue type: 22 DAP embryo - rep1	GSE12508	Transcription patterns during wheat development
6.1	98.1	GSM111211	genotype B11 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
5.7	97.9	GSM111191	genotype G32 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
5.7	97.9	GSM139925	Anther tetrads rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.3	97.6	GSM314285	tissue type: 22 DAP embryo - rep2	GSE12508	Transcription patterns during wheat development

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.30	1e-66	252	Ta.4702.1.S1_x_at	CA728616	-	-	2e+0	At5g49820	emb1879 (embryo defective 1879)	C.G.	S.X.	Please select
0.30	1e-66	252	Ta.4702.1.S1_a_at	CA728616	-	-	2e+0	At5g49820	emb1879 (embryo defective 1879)	C.G.	S.X.	Please select
0.18	9e-40	163	Ta.4702.2.S1_at	BJ270807	-	-	2e-4	At5g49820	emb1879 (embryo defective 1879)	C.G.	S.X.	Please select
0.02	6e-1	34	Ta.29249.1.A1_at	CK196704	-	-	2e-1	At1g56680	glycoside hydrolase family 19 protein	C.G.	S.X.	Please select
0.04	2e+0	32	TaAffx.54277.1.S1_at	CA683549	-	-	9e-1	At1g59630	F-box family protein-related	C.G.	S.X.	Please select
0.03	2e+0	32	TaAffx.12101.2.S1_at	BJ297151	-	-	2e-12	At1g07940	elongation factor 1-alpha / EF-1-alpha	C.G.	S.X.	Please select
0.04	2e+0	32	TaAffx.111365.1.S1_at	CA642217	-	-	4e+0	At3g57900	unknown protein	C.G.	S.X.	Please select
0.04	2e+0	32	Ta.4074.2.A1_at	CA694936	-	-	4e+0	At3g28140	calmodulin-binding protein	C.G.	S.X.	Please select
0.03	2e+0	32	Ta.4074.1.S1_at	CA737052	-	-	3e-1	At1g05970	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	2e+0	32	Arabidopsis thaliana	At5g62220	836343	exostosin family protein	F:catalytic activity;P:unknown;C:chloroplast, membrane;POM	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.05	3e+0	32	Glycine max	GmaAffx.31184.1.A1_at	BE820543	-	-	3e-6	At3g04590	DNA-binding family protein	C.G.	S.X.	Please select
0.12	2e-45	180	Hordeum vulgare	Contig8046_at	Contig8046	-	-	4e-22	At5g49820	emb1879 (embryo defective 1879)	C.G.	S.X.	Please select
0.04	2e+1	30	Oryza sativa	OsAffx.31181.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	1e+1	30	Populus trichocarpa	PtpAffx.22806.2.A1_at	DN486776	-	-	3e+0	At2g35605	SWIB complex BAF60b domain-containing protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.05	3e+0	30	Vitis vinifera	1612394_at	CF200899.1	-	-	7e-1	At1g36580	-	C.G.	S.X.	Please select
0.05	4e+0	30	Zea mays	ZmAffx.824.1.A1_at	AI770504	-	-	3e+0	At5g20370	serine-rich protein-related	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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