Gene omics information

Query gene ID	Ta.4674.1.S1_s_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.2	Ta.4674.1.S1_s_at	BJ269896	-	-	2e+0	At4g27140	2S seed storage protein 1 / 2S albumin storage protein / NWMU1-2S albumin 1	S.X.	H.G.	Please select
0.91	98.2	Ta.4674.1.S1_x_at	BJ269896	-	-	2e+0	At4g27140	2S seed storage protein 1 / 2S albumin storage protein / NWMU1-2S albumin 1	S.X.	H.G.	Please select
0.77	90.8	Ta.4736.1.A1_at	BJ275856	-	-	6e+0	At1g54230	DNA binding	S.X.	H.G.	Please select
0.50	72.4	TaAffx.17013.2.S1_x_at	CA730181	-	-	1e+0	At4g10250	ATHSP22.0	S.X.	H.G.	Please select
0.44	64.5	Ta.13966.2.S1_s_at	CK198271	-	-	2e-1	At5g09750	HEC3 (HECATE 3)	S.X.	H.G.	Please select
0.36	51.9	Ta.30507.1.S1_at	CK214499	-	-	2e+0	At5g35230	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
15.8	99.6	GSM138169	genotype B68 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
11.5	99.3	GSM138184	genotype C25 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
10.0	99.1	GSM138195	genotype J15 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
9.9	99.1	GSM138188	genotype F38a developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
9.3	99.0	GSM314274	tissue type: floral bracts, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
9.3	99.0	GSM138153	genotype G32 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
9.2	99.0	GSM138178	genotype A88 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
8.7	98.9	GSM138200	genotype F48 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
8.5	98.9	GSM138154	genotype H5 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
8.0	98.8	GSM143521	Thatcher_Lr34 (susceptible), mock inoculated basal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.97	7e-158	555	Ta.4674.1.S1_x_at	BJ269896	-	-	2e+0	At4g27140	2S seed storage protein 1 / 2S albumin storage protein / NWMU1-2S albumin 1	C.G.	S.X.	Please select
0.04	1e-1	36	Ta.5504.2.S1_at	CA629406	-	-	2e+1	At4g24130	unknown protein	C.G.	S.X.	Please select
0.04	1e-1	36	Ta.25360.1.A1_at	CD491061	-	-	4e-1	At2g17800	ARAC1	C.G.	S.X.	Please select
0.04	6e-1	34	Ta.2361.1.S1_at	CK198765	-	-	2e-36	At3g45180	ubiquitin family protein	C.G.	S.X.	Please select
0.04	2e+0	32	TaAffx.89328.1.S1_at	AL827218	-	-	1e+0	At2g21600	ATRER1B	C.G.	S.X.	Please select
0.04	2e+0	32	TaAffx.86506.2.S1_x_at	CA731681	-	-	7e-2	At5g22920	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.04	2e+0	32	TaAffx.86506.1.S1_at	CA606911	-	-	1e+0	At3g18140	transducin family protein / WD-40 repeat family protein	C.G.	S.X.	Please select
0.04	2e+0	32	TaAffx.82906.1.S1_at	CA665131	-	-	2e-2	At5g28640	AN3 (ANGUSTIFOLIA 3)	C.G.	S.X.	Please select
0.07	2e+0	32	TaAffx.81306.1.S1_at	CA687646	-	-	8e+0	At3g56030	-	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	2e+0	32	Arabidopsis thaliana	At4g27140	828822	2S seed storage protein 1 / 2S albumin storage protein / NWMU1-2S albumin 1	F:lipid binding, nutrient reservoir activity;P:lipid transport;C:endomembrane system;PMO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.05	8e-1	34	Glycine max	GmaAffx.54853.1.S1_at	BI470148	-	-	8e-1	At4g27140	2S seed storage protein 1 / 2S albumin storage protein / NWMU1-2S albumin 1	C.G.	S.X.	Please select
0.36	7e-39	159	Hordeum vulgare	baak1o23_s_at	baak1o23	-	-	1e+1	At4g18070	unknown protein	C.G.	S.X.	Please select
0.08	7e-5	48	Oryza sativa	Os03g0123800	AK069496.1	-	Conserved hypothetical protein	6e-1	At2g22080	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	2e-1	36	Populus trichocarpa	Ptp.2732.1.S1_at	DN502621	hypothetical protein	-	2e-5	At4g21980	APG8A (AUTOPHAGY 8A)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.06	7e-1	32	Vitis vinifera	1608815_at	CB347086	-	-	8e+0	At5g60810	unknown protein	C.G.	S.X.	Please select
0.04	4e-3	40	Zea mays	Zm.8764.1.A1_at	BM075531	hypothetical protein LOC100216915	-	6e+0	At3g29170	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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