Gene omics information

Query gene ID	Ta.4614.1.A1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.2	Ta.4614.1.A1_at	BJ273705	-	-	3e-5	At4g12780	heat shock protein binding	S.X.	H.G.	Please select
0.40	58.4	Ta.6769.1.A1_at	BJ310785	-	-	4e+0	At5g24640	unknown protein	S.X.	H.G.	Please select
0.08	9.4	Ta.25019.1.S1_at	BT009274.1	-	-	9e-5	At2g23350	PAB4 (POLY(A) BINDING PROTEIN 4)	S.X.	H.G.	Please select
0.06	7.6	Ta.3375.1.S1_at	BQ237107	-	-	4e-15	At1g79230	MST1 (MERCAPTOPYRUVATE SULFURTRANSFERASE 1)	S.X.	H.G.	Please select
0.04	5.8	Ta.7610.1.S1_a_at	CD889532	-	-	1e-6	At5g11560	catalytic	S.X.	H.G.	Please select
0.04	5.8	Ta.2207.1.S1_at	CK200975	-	-	2e-56	At5g05780	RPN8A (RP NON-ATPASE SUBUNIT 8A)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
6.9	98.4	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
5.0	97.4	GSM138209	genotype H23 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.2	96.6	GSM138188	genotype F38a developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.1	96.4	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.6	95.6	GSM138217	genotype H9 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.4	95.2	GSM314269	tissue type: immature inflorescence - rep1	GSE12508	Transcription patterns during wheat development
3.4	95.2	GSM298075	Crown tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.3	95.0	GSM138149	genotype F29 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.3	95.0	GSM138162	genotype E5 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.1	94.5	GSM138192	genotype B33 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.13	3e-20	99	TaAffx.41081.2.A1_at	CA735850	-	-	4e-12	At2g13650	GONST1 (Golgi Nucleotide Sugar Transporter 1)	C.G.	S.X.	Please select
0.07	2e-15	83	TaAffx.41081.1.S1_at	CA670045	-	-	1e-10	At4g12770	heat shock protein binding	C.G.	S.X.	Please select
0.12	7e-3	42	Ta.3498.1.S1_at	BJ219921	-	-	4e-1	At5g03900	-	C.G.	S.X.	Please select
0.02	4e-1	36	TaAffx.131833.1.S1_at	CK203325	-	-	6e+0	At4g24080	ALL1 (Aldolase like)	C.G.	S.X.	Please select
0.05	4e-1	36	TaAffx.128645.1.S1_at	CD492137	-	-	5e+0	At4g33280	DNA binding / transcription factor	C.G.	S.X.	Please select
0.03	4e-1	36	Ta.19555.2.S1_x_at	CA606092	-	-	9e-23	At1g80230	cytochrome c oxidase family protein	C.G.	S.X.	Please select
0.03	4e-1	36	Ta.19555.2.S1_at	CA606092	-	-	9e-23	At1g80230	cytochrome c oxidase family protein	C.G.	S.X.	Please select
0.02	2e+0	34	Ta.5254.1.S1_at	BJ219348	-	-	2e-15	At4g30220	RUXF (SMALL NUCLEAR RIBONUCLEOPROTEIN F)	C.G.	S.X.	Please select
0.01	2e+0	34	Ta.2588.2.S1_a_at	CD900670	-	-	6e-2	At5g23760	heavy-metal-associated domain-containing protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	3e-5	50	Arabidopsis thaliana	At4g12780	826890	heat shock protein binding	F:heat shock protein binding;P:biological_process unknown;C:cellular_component unknown;MBOFPVA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.08	2e-16	87	Glycine max	GmaAffx.42257.2.S1_at	BQ785140	-	-	7e-31	At4g12780	heat shock protein binding	C.G.	S.X.	Please select
0.15	1e-82	305	Hordeum vulgare	Contig1906_at	Contig1906	-	-	2e-16	At4g12780	heat shock protein binding	C.G.	S.X.	Please select
0.13	2e-16	87	Oryza sativa	OsAffx.11200.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.11	4e-17	89	Populus trichocarpa	PtpAffx.26446.1.S1_at	CF234606	hypothetical protein	-	7e-29	At4g12780	heat shock protein binding	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.13	4e-23	107	Vitis vinifera	1616031_at	CF207395	-	-	5e-48	At4g12780	heat shock protein binding	C.G.	S.X.	Please select
0.10	1e-17	89	Zea mays	Zm.4258.1.A1_at	BM348441	hypothetical protein LOC100279927	-	3e-24	At4g12780	heat shock protein binding	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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