Gene omics information

Query gene ID	Ta.4578.1.S1_x_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.98	99.9	Ta.4578.1.S1_x_at	BJ268224	-	-	2e+0	At5g03170	FLA11	S.X.	H.G.	Please select
0.40	58.4	Ta.6698.1.S1_at	CK200349	-	-	2e-9	At3g50590	nucleotide binding	S.X.	H.G.	Please select
0.37	53.0	Ta.15839.1.S1_at	CA498341	-	-	6e+0	At5g29231	unknown protein	S.X.	H.G.	Please select
0.37	53.0	Ta.5527.1.S1_at	BT009478.1	-	-	9e-8	At3g11240	ATE2 (ARGININE-TRNA PROTEIN TRANSFERASE 2)	S.X.	H.G.	Please select
0.36	51.9	Ta.14351.1.S1_at	AB090160.1	G protein beta subunit	-	2e-20	At4g34460	AGB1 (GTP BINDING PROTEIN BETA 1)	S.X.	H.G.	Please select
0.36	51.9	Ta.1847.1.S1_at	CK211033	-	-	2e-13	At5g17900	-	S.X.	H.G.	Please select
0.36	51.9	Ta.23259.3.A1_a_at	CA725169	-	-	9e-1	At1g24062	-	S.X.	H.G.	Please select
0.35	49.8	Ta.21420.1.S1_a_at	BQ170748	-	-	9e-5	At1g05520	transport protein, putative	S.X.	H.G.	Please select
0.34	48.1	Ta.9488.1.S1_at	CD454985	-	-	2e-4	At4g10610	CID12	S.X.	H.G.	Please select
0.34	48.1	Ta.367.1.S1_at	BQ243123	-	-	4e-10	At5g51230	EMF2 (EMBRYONIC FLOWER 2)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
6.7	98.4	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
6.0	98.0	GSM139922	Anther telophaseI-telophaseII rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.1	97.5	GSM139921	Anther diplotene-anaphaseI rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.9	97.3	GSM139917	Anther leptotene-pachytene rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.9	97.3	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.8	97.2	GSM139923	Anther telophaseI-telophaseII rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.4	96.8	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.4	96.8	GSM139930	Anther immature pollen rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.3	96.7	GSM139916	Anther leptotene-pachytene rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.2	96.6	GSM139926	Anther tetrads rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.96	2e-151	533	Ta.4578.1.S1_at	BJ268224	-	-	2e+0	At5g03170	FLA11	C.G.	S.X.	Please select
0.19	2e-10	65	TaAffx.86664.1.S1_at	CA603302	-	-	3e+0	Atmg00110	-	C.G.	S.X.	Please select
0.02	6e-1	34	TaAffx.88477.1.S1_at	BJ287496	-	-	9e-10	At1g77470	replication factor C 36 kDA, putative	C.G.	S.X.	Please select
0.03	2e+0	32	TaAffx.65523.1.A1_at	BJ242244	-	-	2e+0	At3g32960	unknown protein	C.G.	S.X.	Please select
0.04	2e+0	32	TaAffx.55876.1.S1_at	CA660020	-	-	2e+1	At5g03170	FLA11	C.G.	S.X.	Please select
0.03	2e+0	32	Ta.4447.2.S1_x_at	CA607764	-	-	2e-25	At4g32410	CESA1 (CELLULOSE SYNTHASE 1)	C.G.	S.X.	Please select
0.01	2e+0	32	Ta.4447.1.S1_at	BJ260861	-	-	1e-49	At4g32410	CESA1 (CELLULOSE SYNTHASE 1)	C.G.	S.X.	Please select
0.01	2e+0	32	Ta.4447.1.S1_x_at	BJ260861	-	-	1e-49	At4g32410	CESA1 (CELLULOSE SYNTHASE 1)	C.G.	S.X.	Please select
0.02	2e+0	32	Ta.28765.1.A1_at	CD452404	-	-	9e+0	At5g38960	germin-like protein, putative	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	2e+0	32	Arabidopsis thaliana	At5g03170	831914	FLA11	F:unknown;P:unknown;C:anchored to membrane;PBOMAF	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.06	7e-1	34	Glycine max	PsAffx.psML011xO09f_at	PsAffx.psML011xO09f	-	-	6e-5	At3g45180	ubiquitin family protein	C.G.	S.X.	Please select
0.07	7e-8	56	Hordeum vulgare	Contig14404_at	Contig14404	-	-	8e+0	Atmg00110	-	C.G.	S.X.	Please select
0.05	4e+0	32	Oryza sativa	Os09g0295950	9637.m00966	-	-	3e+0	At5g52270	vesicle transport protein-related	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	3e+0	32	Populus trichocarpa	PtpAffx.125107.1.S1_at	CX174205	hypothetical protein	-	3e-1	At3g44870	S-adenosyl-L-methionine:carboxyl methyltransferase family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	3e+0	30	Vitis vinifera	1614807_s_at	CF405955	-	-	3e-22	At1g50010	TUA2	C.G.	S.X.	Please select
0.04	4e+0	30	Zea mays	Zm.9576.1.A1_at	CD999634	iron-sulfur assembly protein IscA	-	3e-4	At1g10500	ATCPISCA (chloroplast-localized IscA-like protein)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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