Gene omics information

Query gene ID Ta.4468.1.S1_at
Gene name Cop8
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.2Ta.4468.1.S1_atCK214137Cop8-4e-52At5g42970COP8 (CONSTITUTIVE PHOTOMORPHOGENIC 8)S.X.H.G.
0.6182.0Ta.9932.2.S1_a_atCD877347--5e-1At5g19180ECR1 (E1 C-terminal related 1)S.X.H.G.
0.6081.0Ta.18139.1.A1_a_atBJ308447--4e+0At5g26220ChaC-like family proteinS.X.H.G.
0.5576.8Ta.9455.1.S1_atCK216399--5e-23At1g11890SEC22S.X.H.G.
0.5374.9Ta.23173.1.S1_atBT009521.1--6e-29At2g43360BIO2 (BIOTIN AUXOTROPH 2)S.X.H.G.
0.5072.4Ta.12123.1.S1_a_atBQ171638--7e-32At5g56280CSN6AS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
7.098.5GSM139914Anther pre-meiosis rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
6.198.1GSM139917Anther leptotene-pachytene rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.897.9GSM139918Anther leptotene-pachytene rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.797.9GSM139929Anther immature pollen rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.297.5GSM139928Anther immature pollen rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.997.3GSM139920Anther diplotene-anaphaseI rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.897.2GSM139916Anther leptotene-pachytene rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.797.1GSM139926Anther tetrads rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.596.9GSM139912Anther pre-meiosis rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.596.9GSM139919Anther diplotene-anaphaseI rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.333e-62240TaAffx.112097.1.S1_atCA627100--1e-18At5g42970COP8 (CONSTITUTIVE PHOTOMORPHOGENIC 8)C.G.S.X.
0.029e-136TaAffx.30130.1.S1_atCA628092--9e-1At5g63135unknown proteinC.G.S.X.
0.029e-136TaAffx.30130.1.S1_x_atCA628092--9e-1At5g63135unknown proteinC.G.S.X.
0.019e-136TaAffx.288.1.A1_atBQ169162--4e-1At5g66815unknown proteinC.G.S.X.
0.019e-136Ta.4879.1.S1_x_atAL829354--5e-1At4g30090emb1353 (embryo defective 1353)C.G.S.X.
0.029e-136Ta.24027.1.A1_x_atCA722568--1e+0At1g78300GRF2 (GENERAL REGULATORY FACTOR 2)C.G.S.X.
0.019e-136Ta.10893.1.S1_atCA678943--7e-1At5g28610-C.G.S.X.
0.014e+034TaAffx.12769.1.S1_atBJ236073--4e+0At5g16880VHS domain-containing protein / GAT domain-containing proteinC.G.S.X.
0.014e+034TaAffx.120510.1.S1_atBJ225140--1e+0At3g53100GDSL-motif lipase/hydrolase family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.304e-52206Arabidopsis thalianaAt5g42970834312COP8 (CONSTITUTIVE PHOTOMORPHOGENIC 8)encodes subunit 4 of COP9 signalosome complex. sequence is similar to a subunit of the 19S regulatory particle of the 26S proteasome. recessive mutation causes derepression of photomorphogenesis.---C.G.S.X.
0.263e-35151Glycine maxGma.2752.1.S1_atAW569178--4e-26At5g42970COP8 (CONSTITUTIVE PHOTOMORPHOGENIC 8)C.G.S.X.
0.286e-139494Hordeum vulgareContig6035_s_atContig6035--8e-5At5g42970COP8 (CONSTITUTIVE PHOTOMORPHOGENIC 8)C.G.S.X.
0.640765Oryza sativaOs03g0197400AK071413.1-COP8 (Constitutive photomorphogenic) homolog (CSNcomplex subunit 4)1e-55At5g42970COP8 (CONSTITUTIVE PHOTOMORPHOGENIC 8)C.G.S.X.
0.363e-41171Populus trichocarpaPtp.4256.1.S1_s_atCK091095--2e-69At5g42970COP8 (CONSTITUTIVE PHOTOMORPHOGENIC 8)C.G.S.X.
0.202e-26119Vitis vinifera1616080_atCF511120hypothetical protein LOC100254062-5e-13At5g42970COP8 (CONSTITUTIVE PHOTOMORPHOGENIC 8)C.G.S.X.
0.591e-179628Zea maysZm.6611.1.A1_atAW076483hypothetical protein LOC100192688-1e-18At5g42970COP8 (CONSTITUTIVE PHOTOMORPHOGENIC 8)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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