CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.4323.1.A1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.97 99.6 Ta.4323.1.A1_at BJ264015 - - 5e-15 At1g24400 LHT2 (LYSINE HISTIDINE TRANSPORTER 2) S.X. H.G.
0.33 46.9 Ta.12421.1.A1_at BQ172303 - - 3e+0 At5g46025 Ras-related GTP-binding family protein S.X. H.G.
0.30 40.9 Ta.12872.1.A1_at BQ280973 - - 5e+0 At5g23580 CDPK9 (CALMODULIN-LIKE DOMAIN PROTEIN KINASE 9) S.X. H.G.
0.30 40.9 Ta.18769.1.S1_at CA641983 - - 3e+0 At5g28720 unknown protein S.X. H.G.
0.30 40.9 Ta.1235.1.S1_at BQ166015 - - 2e-75 At1g60780 HAP13 (HAPLESS 13) S.X. H.G.
0.29 39.2 Ta.13563.1.A1_at BQ166162 - - 2e-1 At3g59650 mitochondrial ribosomal protein L51/S25/CI-B8 family protein S.X. H.G.
0.26 33.6 TaAffx.7979.1.S1_at BJ323090 - - 3e-2 At1g80860 PLMT (PHOSPHOLIPID N-METHYLTRANSFERASE) S.X. H.G.
0.25 32.1 TaAffx.65658.1.S1_s_at BJ239721 - - 4e-1 At4g36500 unknown protein S.X. H.G.
0.25 32.1 TaAffx.7938.1.S1_at CA643397 - - 1e+0 At5g23580 CDPK9 (CALMODULIN-LIKE DOMAIN PROTEIN KINASE 9) S.X. H.G.
0.23 29.0 TaAffx.92426.1.A1_at BJ272116 - - 4e+0 At4g26555 immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
62.3 99.9 GSM315202 target strand labeled: Sense - rep1 GSE12528 Wheat "Chinese Spring" natural antisense transcription survey
24.8 99.8 GSM139933 Anther mature anthers rep3 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
21.3 99.7 GSM314279 tissue type: anthers, before anthesis - rep2 GSE12508 Transcription patterns during wheat development
14.6 99.5 GSM139930 Anther immature pollen rep3 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
13.4 99.5 GSM139922 Anther telophaseI-telophaseII rep1 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
11.1 99.3 GSM315203 target strand labeled: Antisense - rep1 GSE12528 Wheat "Chinese Spring" natural antisense transcription survey
10.5 99.2 GSM298068 Leaf tissue of Paragon at 5 weeks post germination, biological rep 2 GSE11774 Expression data from cold treated wheat cultivars
9.8 99.1 GSM139928 Anther immature pollen rep1 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
7.9 98.7 GSM139929 Anther immature pollen rep2 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
6.6 98.3 GSM138136 Genotype Domain developing seed at 5 days after anthesis, biological rep1 location SB GSE5937 Wheat expression level polymorphism study parental genotypes 2 biological reps from SB location
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 5e-12 71 Ta.12339.1.S1_s_at BT009250.1 - - 5e-15 At1g24400 LHT2 (LYSINE HISTIDINE TRANSPORTER 2) C.G. S.X.
0.05 5e-12 71 Ta.12339.1.S1_at BT009250.1 - - 5e-15 At1g24400 LHT2 (LYSINE HISTIDINE TRANSPORTER 2) C.G. S.X.
0.05 2e-11 69 Ta.3869.1.S1_at CA674403 - - 7e-14 At5g40780 LHT1 C.G. S.X.
0.10 3e-7 56 TaAffx.7030.1.S1_at CA670474 - - 1e-2 At5g40780 LHT1 C.G. S.X.
0.02 3e-1 36 Ta.5294.1.S1_x_at BJ285248 - - 9e-7 At5g35200 epsin N-terminal homology (ENTH) domain-containing protein C.G. S.X.
0.04 3e-1 36 Ta.28479.1.S1_at BJ286275 - - 9e-6 At5g40780 LHT1 C.G. S.X.
0.03 3e-1 36 Ta.26804.1.A1_at CD491242 - - 5e+0 At3g44660 hda10 (histone deacetylase 10) C.G. S.X.
0.03 1e+0 34 TaAffx.53859.1.S1_at CA688358 - - 6e-2 At1g20090 ROP2 (RHO-RELATED PROTEIN FROM PLANTS 2) C.G. S.X.
0.02 1e+0 34 TaAffx.53055.2.S1_at BJ266042 - - 2e+0 At2g10340 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.13 5e-15 81 Arabidopsis thaliana At1g24400 839057 LHT2 (LYSINE HISTIDINE TRANSPORTER 2) High-affinity transporter for neutral and acidic amino acids, expressed in tapetum tissue of anthers - - - C.G. S.X.
0.19 1e-7 57 Glycine max GmaAffx.46129.1.S1_at BI892562 - - 5e-6 At5g40780 LHT1 C.G. S.X.
0.56 7e-96 349 Hordeum vulgare HM10P19r_at HM10P19r - - 1e+0 At4g03298 unknown protein C.G. S.X.
0.25 1e-60 234 Oryza sativa Os12g0244400 AK070297.1 - Amino acid/polyamine transporter II family protein 7e-14 At1g24400 LHT2 (LYSINE HISTIDINE TRANSPORTER 2) C.G. S.X.
0.15 4e-1 36 Populus trichocarpa PtpAffx.42238.1.A1_s_at BP933309 lysine/histidine transporter - 6e-6 At1g48640 lysine and histidine specific transporter, putative C.G. S.X.
0.03 1e+0 32 Vitis vinifera 1621964_at CF207985 hypothetical protein LOC100259817 - 2e-1 At3g44950 glycine-rich protein C.G. S.X.
0.21 8e-9 59 Zea mays Zm.17174.1.A1_at CO531239 hypothetical protein LOC100273979 - 2e-6 At1g24400 LHT2 (LYSINE HISTIDINE TRANSPORTER 2) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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