Gene omics information

Query gene ID	Ta.4052.2.A1_a_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	86.3	Ta.4052.2.A1_a_at	BJ213636	-	-	1e+0	At1g57610	unknown protein	S.X.	H.G.	Please select
0.89	94.6	Ta.9391.2.S1_a_at	CA596737	-	-	1e+0	At1g17130	cell cycle control protein-related	S.X.	H.G.	Please select
0.73	89.1	Ta.484.2.S1_x_at	CK209078	-	-	2e-1	At5g24490	30S ribosomal protein, putative	S.X.	H.G.	Please select
0.63	83.1	Ta.17247.1.A1_a_at	BJ274878	-	-	1e+0	At4g19550	transcription regulator/ zinc ion binding	S.X.	H.G.	Please select
0.63	83.1	Ta.484.1.S1_at	BJ322416	-	-	3e+0	At5g54150	unknown protein	S.X.	H.G.	Please select
0.61	82.0	Ta.4052.1.A1_a_at	BJ263212	-	-	2e+0	At1g57610	unknown protein	S.X.	H.G.	Please select
0.50	72.4	Ta.8965.2.S1_x_at	BQ162698	-	-	1e-1	At3g53850	-	S.X.	H.G.	Please select
0.47	67.9	Ta.8872.1.S1_at	BQ162544	-	-	5e+0	At3g14760	unknown protein	S.X.	H.G.	Please select
0.33	46.9	Ta.4828.1.S1_a_at	BJ272492	-	-	2e-1	At5g66190	FNR1 (FERREDOXIN-NADP(+)-OXIDOREDUCTASE 1)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
10.7	99.2	GSM139930	Anther immature pollen rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
9.0	99.0	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
8.3	98.8	GSM139923	Anther telophaseI-telophaseII rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
7.9	98.7	GSM139926	Anther tetrads rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
7.7	98.7	GSM139918	Anther leptotene-pachytene rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
7.5	98.6	GSM139925	Anther tetrads rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
7.2	98.5	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
7.0	98.5	GSM324486	Si- B- rep3	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
6.9	98.4	GSM314271	tissue type: immature inflorescence - rep3	GSE12508	Transcription patterns during wheat development
6.8	98.4	GSM324492	Si+ B- rep3	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.40	9e-140	496	Ta.4052.1.A1_a_at	BJ263212	-	-	2e+0	At1g57610	unknown protein	C.G.	S.X.	Please select
0.30	7e-45	180	Ta.1887.1.S1_a_at	CK152060	-	-	6e-6	At5g16060	-	C.G.	S.X.	Please select
0.30	7e-45	180	Ta.1887.1.S1_x_at	CK152060	-	-	6e-6	At5g16060	-	C.G.	S.X.	Please select
0.13	8e-20	97	Ta.3844.1.A1_at	CK211740	-	-	4e-1	At1g36940	unknown protein	C.G.	S.X.	Please select
0.10	8e-20	97	Ta.13754.1.S1_s_at	CK216790	-	-	2e-1	At3g22530	unknown protein	C.G.	S.X.	Please select
0.10	8e-20	97	Ta.13754.1.S1_at	CK216790	-	-	2e-1	At3g22530	unknown protein	C.G.	S.X.	Please select
0.14	2e-8	59	Ta.1887.2.S1_x_at	CA612065	-	-	3e-4	At5g16060	-	C.G.	S.X.	Please select
0.05	1e-3	44	TaAffx.37427.2.S1_at	BJ280004	-	-	2e-1	At1g70895	CLE17 (CLAVATA3/ESR-RELATED 17)	C.G.	S.X.	Please select
0.03	1e-3	44	TaAffx.12307.1.S1_at	BJ273010	-	-	5e-1	At3g12170	DNAJ heat shock N-terminal domain-containing protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	1e+0	34	Arabidopsis thaliana	At1g57610	842137	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	3e-1	36	Glycine max	GmaAffx.17275.1.S1_at	BE659000	-	-	4e+0	At3g46130	MYB111 (MYB DOMAIN PROTEIN 111)	C.G.	S.X.	Please select
0.33	2e-43	174	Hordeum vulgare	Contig17424_at	Contig17424	-	-	6e-6	At5g16060	-	C.G.	S.X.	Please select
0.22	4e-14	79	Oryza sativa	Os.49495.3.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.05	3e-1	36	Populus trichocarpa	Ptp.7900.1.S1_at	DN500858	-	-	3e+0	At5g62140	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	3e-1	34	Vitis vinifera	1614844_at	CB005866	-	-	1e-3	At1g11790	ADT1 (arogenate dehydratase 1)	C.G.	S.X.	Please select
0.03	4e-1	34	Zea mays	Zm.5454.1.A1_at	AW231676	hypothetical protein LOC100216687	-	5e+0	At5g17140	cysteine proteinase-related	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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