Gene omics information

Query gene ID Ta.3990.1.S1_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7188.0Ta.3990.1.S1_atBJ262866--2e-5At1g67930Golgi transport complex protein-relatedS.X.H.G.
0.5979.8Ta.13721.2.S1_x_atCA708836--1e+1At5g42630ATS (ABERRANT TESTA SHAPE)S.X.H.G.
0.5072.4Ta.21119.1.S1_a_atCD915118--3e-3At3g63000NPL41 (NPL4-LIKE PROTEIN 1)S.X.H.G.
0.4260.9Ta.1770.1.S1_a_atCK209608--6e-1At4g32930unknown proteinS.X.H.G.
0.3549.8Ta.28850.1.S1_atBJ262711--1e-167At3g09840CDC48 (CELL DIVISION CYCLE 48)S.X.H.G.
0.2939.2Ta.7608.1.S1_x_atCD452795--7e-5At2g17200ubiquitin family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
3.094.3GSM138179genotype A88 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.994.0GSM138213genotype C10 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.994.0GSM111187genotype B68 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological reps
2.893.6GSM111177genotype E5 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological reps
2.793.3GSM138197genotype F82 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.692.9GSM138181genotype A35 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.692.9GSM111215genotype C58 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological reps
2.592.5GSM111144genotype AC Domain developing seed at 5 days after anthesis, biological rep1GSE4929wheat expression level polymorphism study parental genotypes 2 biological reps
2.592.5GSM111211genotype B11 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological reps
2.592.5GSM111200genotype D39 developing seed at 5 days after anthesis, biological rep1GSE4935wheat expression level polymorphism study 39 genotypes 2 biological reps
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.035e-1893TaAffx.120067.1.S1_atBJ245595--1e-23At5g28290ATNEK3 (NIMA-RELATED KINASE3)C.G.S.X.
0.045e-1893Ta.15943.1.S1_atCA501927--3e+0At4g32915-C.G.S.X.
0.021e-1275TaAffx.94395.1.S1_atAW448144--6e-4At1g18410kinesin motor protein-relatedC.G.S.X.
0.031e-1275TaAffx.122147.1.S1_atCA637033--1e-1At5g36080unknown proteinC.G.S.X.
0.031e-1275TaAffx.114016.1.S1_atCA599997--6e+0At5g41400zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.031e-1275TaAffx.107001.1.S1_atCA655134--4e-8At2g18162CPuORF1 (Conserved peptide upstream open reading frame 1)C.G.S.X.
0.021e-1275Ta.3329.1.S1_atBJ210428--8e-1At4g23410TET5 (TETRASPANIN5)C.G.S.X.
0.031e-1275Ta.15953.1.S1_atCA631103--4e+0At2g33430DAL1 (DIFFERENTIATION AND GREENING-LIKE 1)C.G.S.X.
0.025e-1273TaAffx.92408.1.S1_atCF132877--3e+0At3g23480cyclopropane fatty acid synthase-relatedC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.042e-552Arabidopsis thalianaAt1g67930843121Golgi transport complex protein-relatedF:unknown;P:unknown;C:chloroplast;OMFBPV---C.G.S.X.
0.146e-963Glycine maxGmaAffx.50688.1.S1_atBI972174--6e-9At1g67930Golgi transport complex protein-relatedC.G.S.X.
0.8302468Hordeum vulgareContig13262_atContig13262--1e-5At1g67930Golgi transport complex protein-relatedC.G.S.X.
0.5901439Oryza sativaOs05g0378900AK058213.1-Conserved hypothetical protein4e-7At1g67930Golgi transport complex protein-relatedC.G.S.X.
0.074e-448Populus trichocarpaPtp.1777.1.S1_atCK092218hypothetical protein-4e-11At1g67930Golgi transport complex protein-relatedC.G.S.X.
0.021e+034Vitis vinifera1613127_atCF604632hypothetical protein LOC100252080-1e-3At5g50260cysteine proteinase, putativeC.G.S.X.
0.032e-1583Zea maysZm.13785.1.S1_s_atCD434243--1e+0At3g52525OFP6 (OVATE FAMILY PROTEIN 6)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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