Gene omics information

Query gene ID	Ta.3797.3.S1_x_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.71	88.0	Ta.3797.3.S1_x_at	CA602105	-	-	2e+1	At5g11425	unknown protein	S.X.	H.G.	Please select
0.71	88.0	Ta.3797.3.S1_a_at	CA602105	-	-	2e+1	At5g11425	unknown protein	S.X.	H.G.	Please select
0.50	72.4	Ta.10203.3.S1_a_at	CA659053	-	-	1e-2	At5g03030	DNAJ heat shock N-terminal domain-containing protein	S.X.	H.G.	Please select
0.36	51.9	Ta.12576.2.S1_a_at	BJ300510	-	-	4e+0	At5g62350	invertase/pectin methylesterase inhibitor family protein / DC 1.2 homolog (FL5-2I22)	S.X.	H.G.	Please select
0.33	46.9	Ta.4869.1.S1_at	BJ228959	-	-	2e+0	At4g01915	unknown protein	S.X.	H.G.	Please select
0.29	39.2	Ta.2982.1.S1_a_at	AY135021.1	GTP-binding protein	-	3e-37	At1g30580	GTP binding	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
3.4	95.2	GSM298072	Crown tissue of Paragon at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.3	95.0	GSM314254	tissue type: germinating seed, root - rep1	GSE12508	Transcription patterns during wheat development
3.1	94.5	GSM314258	tissue type: germinating seed, embryo - rep2	GSE12508	Transcription patterns during wheat development
3.0	94.3	GSM298073	Crown tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.0	94.3	GSM298076	Crown tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
2.9	94.0	GSM314276	tissue type: pistil, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
2.9	94.0	GSM298075	Crown tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
2.9	94.0	GSM298071	Crown tissue of Paragon at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
2.9	94.0	GSM314269	tissue type: immature inflorescence - rep1	GSE12508	Transcription patterns during wheat development
2.9	94.0	GSM298062	Crown tissue of Harnesk at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
1.00	0	866	Ta.3797.3.S1_a_at	CA602105	-	-	2e+1	At5g11425	unknown protein	C.G.	S.X.	Please select
0.28	1e-117	422	Ta.3797.1.S1_a_at	CK214587	-	-	5e-11	At1g03900	ATNAP4 (Arabidopsis thaliana non-intrinsic ABC protein 4)	C.G.	S.X.	Please select
0.05	7e-2	38	TaAffx.63795.1.A1_at	BQ236512	-	-	1e+1	At5g54190	PORA	C.G.	S.X.	Please select
0.03	4e+0	32	TaAffx.95401.1.S1_at	BE498455	-	-	1e+0	At5g11930	glutaredoxin family protein	C.G.	S.X.	Please select
0.03	4e+0	32	TaAffx.1124.1.S1_at	BJ233977	-	-	1e+0	At2g22120	protein binding / zinc ion binding	C.G.	S.X.	Please select
0.04	4e+0	32	Ta.3588.1.S1_at	BJ213313	-	-	6e-2	At1g26796	-	C.G.	S.X.	Please select
0.03	4e+0	32	Ta.13313.1.S1_at	BQ483761	-	-	9e-2	At1g68060	ATMAP70-1 (microtubule-associated proteins 70-1)	C.G.	S.X.	Please select
0.02	2e+1	30	TaAffx.84262.1.S1_at	CA641290	-	-	2e+0	At3g25597	unknown protein	C.G.	S.X.	Please select
0.04	2e+1	30	TaAffx.83485.1.S1_at	CA657025	-	-	9e-1	At1g32630	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	2e+1	30	Arabidopsis thaliana	At5g11425	6240859	unknown protein	F:unknown;P:unknown;C:unknown	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.05	2e+0	34	Glycine max	HgAffx.22347.1.S1_at	BI396733	-	-	5e+0	At4g09970	unknown protein	C.G.	S.X.	Please select
0.25	3e-107	387	Hordeum vulgare	Contig8531_at	Contig8531	-	-	2e-13	At1g03900	ATNAP4 (Arabidopsis thaliana non-intrinsic ABC protein 4)	C.G.	S.X.	Please select
0.19	7e-19	95	Oryza sativa	Os10g0476000	AK065629.1	-	Conserved hypothetical protein	1e-14	At1g03900	ATNAP4 (Arabidopsis thaliana non-intrinsic ABC protein 4)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	1e-1	38	Populus trichocarpa	Ptp.3312.1.S1_at	BU812841	-	-	1e+0	At4g04730	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	1e+0	32	Vitis vinifera	1620727_at	CF202620.1	-	-	2e-11	At3g14600	60S ribosomal protein L18A (RPL18aC)	C.G.	S.X.	Please select
0.21	3e-27	121	Zea mays	Zm.5635.1.A1_at	AY111142.1	hypothetical protein LOC100192009	-	3e-18	At1g03900	ATNAP4 (Arabidopsis thaliana non-intrinsic ABC protein 4)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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