CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.3463.1.S1_x_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.77 90.8 Ta.3463.1.S1_x_at BQ753035 - - 4e-20 At5g42990 UBC18 (ubiquitin-conjugating enzyme 18) S.X. H.G.
0.67 86.3 Ta.3365.1.S1_at CD920769 - - 6e-1 At4g22220 ISU1 S.X. H.G.
0.60 81.0 Ta.14532.1.S1_at CD900916 - - 4e-45 At1g14400 UBC1 (UBIQUITIN CARRIER PROTEIN 1) S.X. H.G.
0.55 76.8 Ta.3463.3.S1_a_at CA681836 - - 2e-5 At4g36410 UBC17 (UBIQUITIN-CONJUGATING ENZYME 17) S.X. H.G.
0.50 72.4 Ta.2361.1.S1_at CK198765 - - 2e-36 At3g45180 ubiquitin family protein S.X. H.G.
0.19 22.4 Ta.9297.1.S1_at BJ321859 - - 2e+0 At2g07669 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
4.0 96.3 GSM324488 Si- B+ rep2 GSE12936 Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
3.8 96.0 GSM298082 Leaf tissue of Solstice at 9 weeks post germination, biological rep 2 GSE11774 Expression data from cold treated wheat cultivars
3.8 96.0 GSM143515 Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 1 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
3.4 95.2 GSM298091 Leaf tissue of Solstice at 9 weeks post germination GSE11774 Expression data from cold treated wheat cultivars
3.2 94.8 GSM250902 Tc_7dpi_inoculated_rep1 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.2 94.8 GSM250908 Tc_7dpi_inoculated_rep2 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.2 94.8 GSM250914 Tc_7dpi_inoculated_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.9 94.0 GSM324484 Si- B- rep1 GSE12936 Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
2.9 94.0 GSM143517 Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 3 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
2.9 94.0 GSM298081 Leaf tissue of Solstice at 9 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.53 2e-179 628 Ta.3463.3.S1_a_at CA681836 - - 2e-5 At4g36410 UBC17 (UBIQUITIN-CONJUGATING ENZYME 17) C.G. S.X.
0.53 2e-179 628 Ta.3463.3.S1_x_at CA681836 - - 2e-5 At4g36410 UBC17 (UBIQUITIN-CONJUGATING ENZYME 17) C.G. S.X.
0.40 2e-136 486 Ta.3463.2.S1_at CA621825 - - 4e-6 At5g42990 UBC18 (ubiquitin-conjugating enzyme 18) C.G. S.X.
0.42 4e-97 355 Ta.8244.1.S1_at CN012684 - - 3e-14 At5g42990 UBC18 (ubiquitin-conjugating enzyme 18) C.G. S.X.
0.33 7e-62 238 Ta.26820.1.A1_at CD491334 - - 2e-30 At5g42990 UBC18 (ubiquitin-conjugating enzyme 18) C.G. S.X.
0.29 3e-42 173 Ta.8244.2.S1_a_at CA651206 - - 1e-15 At5g42990 UBC18 (ubiquitin-conjugating enzyme 18) C.G. S.X.
0.29 3e-42 173 Ta.8244.2.S1_x_at CA651206 - - 1e-15 At5g42990 UBC18 (ubiquitin-conjugating enzyme 18) C.G. S.X.
0.32 3e-30 133 TaAffx.31171.1.S1_at CA618854 - - 3e-4 At5g42990 UBC18 (ubiquitin-conjugating enzyme 18) C.G. S.X.
0.03 1e-1 38 TaAffx.65466.1.S1_at BJ244879 - - 2e+1 At5g34581 hydroxyproline-rich glycoprotein family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.28 4e-20 99 Arabidopsis thaliana At5g42990 834314 UBC18 (ubiquitin-conjugating enzyme 18) F:ubiquitin-protein ligase activity, small conjugating protein ligase activity;P:ubiquitin-dependent protein catabolic process;C:unknown;MFOPV - - - C.G. S.X.
0.28 5e-8 59 Glycine max GmaAffx.92802.1.S1_s_at CF806550 - - 8e-33 At1g75440 UBC16 (ubiquitin-conjugating enzyme 16) C.G. S.X.
0.77 0 969 Hordeum vulgare Contig8813_at Contig8813 - - 4e-23 At5g42990 UBC18 (ubiquitin-conjugating enzyme 18) C.G. S.X.
0.45 3e-90 333 Oryza sativa Os12g0636800 AK071648.1 - Ubiquitin-conjugating enzyme 18 (Fragment) 5e-13 At5g42990 UBC18 (ubiquitin-conjugating enzyme 18) C.G. S.X.
0.11 1e-2 42 Populus trichocarpa PtpAffx.205792.1.S1_at pmrna11454 hypothetical protein - 2e-47 At1g45050 ATUBC2-1 C.G. S.X.
0.14 4e-17 87 Vitis vinifera 1620685_s_at CF371876 hypothetical protein LOC100260813 - 4e-85 At1g75440 UBC16 (ubiquitin-conjugating enzyme 16) C.G. S.X.
0.37 8e-75 280 Zea mays Zm.8033.1.S1_at CO522473 ubiquitin-conjugating enzyme E2 W - 1e-26 At5g42990 UBC18 (ubiquitin-conjugating enzyme 18) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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