Gene omics information

Query gene ID	Ta.3381.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.2	Ta.3381.1.S1_at	AF123602.1	-	-	9e-1	At4g31940	CYP82C4	S.X.	H.G.	Please select
0.91	98.2	Ta.3382.1.S1_at	AB042627.1	-	-	4e+0	At3g21460	electron carrier/ protein disulfide oxidoreductase	S.X.	H.G.	Please select
0.91	98.2	Ta.23822.1.S1_at	AF123603.1	-	-	6e-2	At2g36026	-	S.X.	H.G.	Please select
0.83	93.4	Ta.1362.1.S1_at	AB042631.1	-	-	1e-2	At5g25130	CYP71B12	S.X.	H.G.	Please select
0.77	90.8	Ta.3380.1.S1_at	AB042629.1	-	-	2e-2	At2g36026	-	S.X.	H.G.	Please select
0.77	90.8	Ta.23042.1.S1_x_at	BE517350	-	-	1e-2	At5g54160	ATOMT1 (O-METHYLTRANSFERASE 1)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
67.6	100.0	GSM314251	tissue type: germinating seed, coleoptile - rep1	GSE12508	Transcription patterns during wheat development
63.0	99.9	GSM314258	tissue type: germinating seed, embryo - rep2	GSE12508	Transcription patterns during wheat development
52.2	99.9	GSM314259	tissue type: germinating seed, embryo - rep3	GSE12508	Transcription patterns during wheat development
43.8	99.9	GSM314253	tissue type: germinating seed, coleoptile - rep3	GSE12508	Transcription patterns during wheat development
43.2	99.9	GSM314257	tissue type: germinating seed, embryo - rep1	GSE12508	Transcription patterns during wheat development
33.3	99.9	GSM314252	tissue type: germinating seed, coleoptile - rep2	GSE12508	Transcription patterns during wheat development
11.1	99.3	GSM314265	tissue type: seedling, crown - rep3	GSE12508	Transcription patterns during wheat development
10.2	99.2	GSM314264	tissue type: seedling, crown - rep2	GSE12508	Transcription patterns during wheat development
8.3	98.8	GSM314263	tissue type: seedling, crown - rep1	GSE12508	Transcription patterns during wheat development
5.3	97.6	GSM298072	Crown tissue of Paragon at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.32	9e-35	149	Ta.3380.1.S1_at	AB042629.1	-	-	2e-2	At2g36026	-	C.G.	S.X.	Please select
0.35	5e-33	143	Ta.23822.1.S1_at	AF123603.1	-	-	6e-2	At2g36026	-	C.G.	S.X.	Please select
0.21	3e-28	127	Ta.3382.1.S1_at	AB042627.1	-	-	4e+0	At3g21460	electron carrier/ protein disulfide oxidoreductase	C.G.	S.X.	Please select
0.15	3e-22	107	TaAffx.30325.1.S1_at	CA626164	-	-	1e+1	At5g23030	TET12 (TETRASPANIN12)	C.G.	S.X.	Please select
0.13	2e-20	101	TaAffx.107391.1.S1_at	CA700505	-	-	1e+0	At3g57390	AGL18	C.G.	S.X.	Please select
0.11	6e-8	59	TaAffx.98093.1.S1_at	BQ168675	-	-	5e-3	At5g53800	unknown protein	C.G.	S.X.	Please select
0.05	1e-6	56	Ta.4306.1.S1_at	CA684557	-	-	2e-1	At5g58570	unknown protein	C.G.	S.X.	Please select
0.05	4e-6	54	TaAffx.6564.1.S1_at	CA683008	-	-	2e-2	At3g24506	unknown protein	C.G.	S.X.	Please select
0.10	4e-6	54	TaAffx.5060.1.S1_at	CA724022	-	-	1e+0	At2g30766	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	9e-1	36	Arabidopsis thaliana	At4g31940	829324	CYP82C4	member of CYP82C	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.02	8e-2	40	Glycine max	GmaAffx.51195.1.S1_at	BM887103	-	-	2e-1	At1g70700	TIFY7	C.G.	S.X.	Please select
0.10	8e-12	71	Hordeum vulgare	Contig11957_at	Contig11957	-	-	5e-2	At3g48280	CYP71A25	C.G.	S.X.	Please select
0.03	1e-1	40	Oryza sativa	Os08g0105800	AK067200.1	-	E-class P450, group I family protein	7e-5	At3g44250	CYP71B38	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.02	5e+0	34	Populus trichocarpa	PtpAffx.82894.1.A1_s_at	CV228375	-	-	1e+1	At5g16390	CAC1 (CHLOROPLASTIC ACETYLCOENZYME A CARBOXYLASE 1)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.01	4e+0	32	Vitis vinifera	1621621_at	CA818367	-	-	4e+0	At5g49040	disease resistance-responsive protein-related / dirigent protein-related	C.G.	S.X.	Please select
0.39	3e-85	315	Zea mays	Zm.5605.1.S1_at	CO528780	-	-	1e+0	At1g18680	HNH endonuclease domain-containing protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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