Gene omics information

Query gene ID	Ta.3375.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	86.3	Ta.3375.1.S1_at	BQ237107	-	-	4e-15	At1g79230	MST1 (MERCAPTOPYRUVATE SULFURTRANSFERASE 1)	S.X.	H.G.	Please select
0.67	86.3	Ta.24646.1.S1_a_at	CA704417	-	-	1e-20	At1g75330	OTC (ORNITHINE CARBAMOYLTRANSFERASE)	S.X.	H.G.	Please select
0.63	83.1	Ta.24646.2.A1_a_at	CA618857	-	-	3e-1	At2g48140	EDA4 (embryo sac development arrest 4)	S.X.	H.G.	Please select
0.53	74.9	Ta.29595.1.A1_at	CD373725	-	-	1e+0	At5g41640	unknown protein	S.X.	H.G.	Please select
0.50	72.4	Ta.9280.2.A1_at	AL826205	-	-	1e+0	At1g47813	unknown protein	S.X.	H.G.	Please select
0.46	66.8	Ta.2830.1.S1_at	CD934919	-	-	4e-6	At3g14100	oligouridylate-binding protein, putative	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
2.7	93.3	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.5	92.5	GSM139923	Anther telophaseI-telophaseII rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.5	92.5	GSM139924	Anther telophaseI-telophaseII rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.4	92.0	GSM139922	Anther telophaseI-telophaseII rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.4	92.0	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
2.2	91.0	GSM139920	Anther diplotene-anaphaseI rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.2	91.0	GSM139917	Anther leptotene-pachytene rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.2	91.0	GSM343682	Wheat var. Kennedy_control_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
2.1	90.3	GSM139921	Anther diplotene-anaphaseI rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.0	89.7	GSM138217	genotype H9 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.78	0	1782	Ta.27097.1.S1_at	BT009614.1	-	-	3e-9	At1g79230	MST1 (MERCAPTOPYRUVATE SULFURTRANSFERASE 1)	C.G.	S.X.	Please select
0.29	1e-91	337	TaAffx.81105.1.S1_at	CA689474	-	-	3e-4	At1g79230	MST1 (MERCAPTOPYRUVATE SULFURTRANSFERASE 1)	C.G.	S.X.	Please select
0.26	6e-85	315	TaAffx.43141.1.A1_at	CA722028	-	-	1e+0	At1g07950	surfeit locus protein 5 family protein / SURF5 family protein	C.G.	S.X.	Please select
0.02	5e-2	40	TaAffx.12901.1.S1_at	BJ235447	-	-	4e-11	At5g02240	binding / catalytic/ coenzyme binding	C.G.	S.X.	Please select
0.02	2e-1	38	TaAffx.80516.1.S1_at	CA695830	-	-	3e-1	At1g54870	binding / catalytic/ oxidoreductase	C.G.	S.X.	Please select
0.02	2e-1	38	Ta.5704.1.A1_at	BJ288089	-	-	7e+0	At5g38980	unknown protein	C.G.	S.X.	Please select
0.05	2e-1	38	Ta.28397.1.A1_at	CD454353	-	-	1e-4	At1g79230	MST1 (MERCAPTOPYRUVATE SULFURTRANSFERASE 1)	C.G.	S.X.	Please select
0.04	2e-1	38	Ta.2761.1.S1_at	AY036608.1	Thiosulfate transferase	-	3e+0	Atmg00680	-	C.G.	S.X.	Please select
0.04	8e-1	36	TaAffx.131176.1.S1_at	BF482824	-	-	4e+0	At5g43770	proline-rich family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.21	4e-15	83	Arabidopsis thaliana	At1g79230	844264	MST1 (MERCAPTOPYRUVATE SULFURTRANSFERASE 1)	encodes a sulfurtransferase/rhodaneses, which belongs to a group of enzymes widely distributed in all three phyla that catalyze the transfer of sulfur from a donor to a thiophilic acceptor substrate. The protein and transcript levels are NOT affected by senescence or exogenous cyanide, suggesting that sulfurtransferases are involved in cyanide detoxification.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.21	6e-24	113	Glycine max	Gma.1406.1.S1_at	CD416935	-	-	1e-92	At1g79230	MST1 (MERCAPTOPYRUVATE SULFURTRANSFERASE 1)	C.G.	S.X.	Please select
0.80	0	1929	Hordeum vulgare	Contig583_at	Contig583	-	-	2e-13	At1g79230	MST1 (MERCAPTOPYRUVATE SULFURTRANSFERASE 1)	C.G.	S.X.	Please select
0.57	0	1011	Oryza sativa	Os12g0608600	AK059102.1	-	-	9e-10	At1g79230	MST1 (MERCAPTOPYRUVATE SULFURTRANSFERASE 1)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.24	3e-22	107	Populus trichocarpa	PtpAffx.196.1.S1_at	CV228371	hypothetical protein	-	1e-91	At1g79230	MST1 (MERCAPTOPYRUVATE SULFURTRANSFERASE 1)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.10	4e-9	61	Vitis vinifera	1618747_at	CF212116	hypothetical protein LOC100261543	-	7e-8	At1g16460	ATRDH2 (ARABIDOPSIS THALIANA RHODANESE HOMOLOGUE 2)	C.G.	S.X.	Please select
0.58	0	971	Zea mays	Zm.7755.1.A1_at	CN845074	hypothetical protein LOC100275494	-	3e-18	At1g16460	ATRDH2 (ARABIDOPSIS THALIANA RHODANESE HOMOLOGUE 2)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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