Gene omics information

Query gene ID	Ta.3322.3.S1_a_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.75	89.8	Ta.3322.3.S1_a_at	CA649562	-	-	2e-5	At4g18030	dehydration-responsive family protein	S.X.	H.G.	Please select
0.40	58.4	TaAffx.47952.1.A1_at	BJ230741	-	-	1e-1	At4g38420	sks9 (SKU5 Similar 9)	S.X.	H.G.	Please select
0.33	46.9	Ta.3322.1.S1_s_at	CK208679	-	-	4e-50	At1g26850	dehydration-responsive family protein	S.X.	H.G.	Please select
0.31	42.7	TaAffx.56884.1.S1_at	CA641860	-	-	1e+1	At5g48280	unknown protein	S.X.	H.G.	Please select
0.23	29.0	Ta.6945.1.A1_at	BJ319268	-	-	3e+0	At3g09940	MDHAR (MONODEHYDROASCORBATE REDUCTASE)	S.X.	H.G.	Please select
0.08	9.4	Ta.10065.1.S1_at	CD937007	-	-	1e+0	At3g30725	AtGDU6 (Arabidopsis thaliana GLUTAMINE DUMPER 6)	S.X.	H.G.	Please select
0.08	9.4	Ta.9117.1.A1_a_at	BJ216810	-	-	2e+0	At1g51010	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
12.4	99.4	GSM314252	tissue type: germinating seed, coleoptile - rep2	GSE12508	Transcription patterns during wheat development
11.0	99.3	GSM314251	tissue type: germinating seed, coleoptile - rep1	GSE12508	Transcription patterns during wheat development
8.9	99.0	GSM314253	tissue type: germinating seed, coleoptile - rep3	GSE12508	Transcription patterns during wheat development
6.7	98.4	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.7	97.1	GSM298062	Crown tissue of Harnesk at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.3	96.7	GSM298059	Crown tissue of Harnesk at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.3	96.7	GSM298061	Crown tissue of Harnesk at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.2	96.6	GSM298087	Crown tissue of Solstice at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.2	96.6	GSM139926	Anther tetrads rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.0	96.3	GSM314265	tissue type: seedling, crown - rep3	GSE12508	Transcription patterns during wheat development

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
1.00	0	1031	Ta.3322.3.S1_x_at	CA649562	-	-	2e-5	At4g18030	dehydration-responsive family protein	C.G.	S.X.	Please select
0.18	1e-123	442	Ta.3322.1.S1_s_at	CK208679	-	-	4e-50	At1g26850	dehydration-responsive family protein	C.G.	S.X.	Please select
0.14	1e-6	54	Ta.4185.1.A1_at	BJ272995	-	-	9e-8	At1g26850	dehydration-responsive family protein	C.G.	S.X.	Please select
0.07	5e-6	52	Ta.3957.1.A1_x_at	BJ274255	-	-	1e-1	At2g03480	dehydration-responsive protein-related	C.G.	S.X.	Please select
0.07	5e-6	52	Ta.3957.1.A1_at	BJ274255	-	-	1e-1	At2g03480	dehydration-responsive protein-related	C.G.	S.X.	Please select
0.08	2e-5	50	Ta.6370.1.S1_at	BJ308985	-	-	6e-10	At1g26850	dehydration-responsive family protein	C.G.	S.X.	Please select
0.02	5e-3	42	Ta.5250.1.S1_s_at	CK198169	-	-	2e-46	At4g14360	dehydration-responsive protein-related	C.G.	S.X.	Please select
0.05	5e-3	42	Ta.5250.3.S1_a_at	CA602002	-	-	3e-7	At4g14360	dehydration-responsive protein-related	C.G.	S.X.	Please select
0.05	2e-2	40	Ta.26255.1.S1_at	CD491636	-	-	6e-13	At5g64030	dehydration-responsive protein-related	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.06	2e-5	50	Arabidopsis thaliana	At4g18030	827528	dehydration-responsive family protein	F:unknown;P:biological_process unknown;C:Golgi apparatus, plasma membrane, plant-type cell wall;PBO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.17	2e-12	73	Glycine max	GmaAffx.9474.1.S1_at	AW570282	-	-	1e-10	At1g26850	dehydration-responsive family protein	C.G.	S.X.	Please select
0.43	1e-131	468	Hordeum vulgare	Contig13791_at	Contig13791	-	-	3e-11	At1g26850	dehydration-responsive family protein	C.G.	S.X.	Please select
0.12	4e-51	202	Oryza sativa	Os.23266.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.18	3e-17	89	Populus trichocarpa	Ptp.532.1.S1_at	CK088410	hypothetical protein	-	1e-4	At1g26850	dehydration-responsive family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.09	6e-18	89	Vitis vinifera	1618429_at	CB980302	hypothetical protein LOC100267238	-	5e-4	At2g40280	dehydration-responsive family protein	C.G.	S.X.	Please select
0.07	1e-4	46	Zea mays	Zm.3522.1.S1_at	BG265505	-	-	1e-19	At4g00740	dehydration-responsive protein-related	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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