Gene omics information

Query gene ID	Ta.3321.1.A1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.92	98.5	Ta.3321.1.A1_at	BJ217547	-	-	4e-10	At3g24200	FAD binding / monooxygenase/ oxidoreductase/ oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen	S.X.	H.G.	Please select
0.80	92.2	Ta.3321.2.A1_x_at	BQ162509	-	-	3e-8	At3g24200	FAD binding / monooxygenase/ oxidoreductase/ oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen	S.X.	H.G.	Please select
0.60	81.0	Ta.8158.1.A1_at	BQ161496	-	-	4e-1	At5g04120	phosphoglycerate/bisphosphoglycerate mutase family protein	S.X.	H.G.	Please select
0.50	72.4	Ta.8098.2.S1_at	CA656870	-	-	6e+0	At3g14200	DNAJ heat shock N-terminal domain-containing protein	S.X.	H.G.	Please select
0.42	60.9	Ta.8749.1.S1_a_at	BJ262188	-	-	5e-14	At3g03330	short-chain dehydrogenase/reductase (SDR) family protein	S.X.	H.G.	Please select
0.36	51.9	Ta.10112.1.S1_at	CD884721	-	-	4e-12	At3g20650	mRNA capping enzyme family protein	S.X.	H.G.	Please select
0.32	44.4	Ta.3071.1.S1_at	BG906655	-	-	2e-1	At4g08760	-	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
4.8	97.2	GSM314286	tissue type: 22 DAP embryo - rep3	GSE12508	Transcription patterns during wheat development
4.2	96.6	GSM314275	tissue type: pistil, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
4.0	96.3	GSM314285	tissue type: 22 DAP embryo - rep2	GSE12508	Transcription patterns during wheat development
3.9	96.1	GSM298076	Crown tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.9	96.1	GSM314277	tissue type: pistil, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
3.5	95.4	GSM298075	Crown tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.3	95.0	GSM314284	tissue type: 22 DAP embryo - rep1	GSE12508	Transcription patterns during wheat development
3.2	94.8	GSM298072	Crown tissue of Paragon at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
2.9	94.0	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.8	93.6	GSM111232	genotype H8 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.97	0	1126	Ta.3321.1.A1_a_at	BJ217547	-	-	4e-10	At3g24200	FAD binding / monooxygenase/ oxidoreductase/ oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen	C.G.	S.X.	Please select
0.76	3e-97	355	Ta.3321.2.A1_x_at	BQ162509	-	-	3e-8	At3g24200	FAD binding / monooxygenase/ oxidoreductase/ oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen	C.G.	S.X.	Please select
0.03	1e-1	38	TaAffx.84267.1.S1_at	CA641170	-	-	3e-1	At1g60450	AtGolS7 (Arabidopsis thaliana galactinol synthase 7)	C.G.	S.X.	Please select
0.03	1e-1	38	Ta.2994.2.S1_at	BJ304533	-	-	2e-17	At1g24340	emb2421 (embryo defective 2421)	C.G.	S.X.	Please select
0.04	4e-1	36	TaAffx.95068.1.S1_at	BJ231602	-	-	2e+1	At5g58005	unknown protein	C.G.	S.X.	Please select
0.02	4e-1	36	Ta.27038.1.S1_x_at	BT009566.1	-	-	4e-2	At3g54960	ATPDIL1-3 (PDI-LIKE 1-3)	C.G.	S.X.	Please select
0.02	4e-1	36	Ta.27038.1.S1_s_at	BT009566.1	-	-	4e-2	At3g54960	ATPDIL1-3 (PDI-LIKE 1-3)	C.G.	S.X.	Please select
0.02	4e-1	36	Ta.27038.1.S1_at	BT009566.1	-	-	4e-2	At3g54960	ATPDIL1-3 (PDI-LIKE 1-3)	C.G.	S.X.	Please select
0.03	2e+0	34	TaAffx.93004.1.S1_at	BJ236110	-	-	1e+0	At3g04450	transcription factor	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.07	4e-10	65	Arabidopsis thaliana	At3g24200	822006	FAD binding / monooxygenase/ oxidoreductase/ oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen	F:oxidoreductase activity, monooxygenase activity, FAD binding, oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen;P:ubiquinone biosynthetic process, metabolic process;C:unknown;BOFMPA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	5e-1	36	Glycine max	Gma.7632.1.S1_at	BI786556	-	-	1e+1	At4g15953	-	C.G.	S.X.	Please select
0.44	3e-89	327	Hordeum vulgare	Contig12888_at	Contig12888	-	-	3e-2	At3g24200	FAD binding / monooxygenase/ oxidoreductase/ oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen	C.G.	S.X.	Please select
0.20	4e-36	153	Oryza sativa	Os.56320.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	8e+0	32	Populus trichocarpa	PtpAffx.42128.1.S1_at	DN484821	-	-	6e+0	At5g57747	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	1e-1	36	Vitis vinifera	1608546_at	CF212193	hypothetical protein LOC100254967	-	1e+1	At5g49230	HRB1 (HYPERSENSITIVE TO RED AND BLUE)	C.G.	S.X.	Please select
0.03	6e-1	34	Zea mays	Zm.15106.1.A1_at	AI065782	-	-	7e-1	At2g29360	tropinone reductase, putative / tropine dehydrogenase, putative	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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