Gene omics information

Query gene ID	Ta.3203.2.S1_x_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.44	64.5	Ta.3203.2.S1_x_at	CA621738	-	-	5e-6	At1g27530	-	S.X.	H.G.	Please select
0.67	86.3	TaAffx.58638.1.S1_at	CA617698	-	-	4e+0	At1g12805	nucleotide binding	S.X.	H.G.	Please select
0.67	86.3	TaAffx.30673.1.S1_at	CA623010	-	-	7e-11	At4g25630	FIB2 (FIBRILLARIN 2)	S.X.	H.G.	Please select
0.47	67.9	TaAffx.78861.1.S1_at	CA725589	-	-	1e+1	At3g28070	nodulin MtN21 family protein	S.X.	H.G.	Please select
0.40	58.4	TaAffx.112158.1.S1_at	CA626538	-	-	2e+1	At3g28590	unknown protein	S.X.	H.G.	Please select
0.33	46.9	Ta.12360.1.A1_at	CA648024	-	-	4e+0	At1g70220	unknown protein	S.X.	H.G.	Please select
0.29	39.2	TaAffx.3664.1.S1_at	CD876496	-	-	2e+0	At2g47710	universal stress protein (USP) family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
16.6	99.6	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
5.1	97.5	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.9	97.3	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
4.9	97.3	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.7	97.1	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.5	96.9	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.1	96.4	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.9	96.1	GSM138163	genotype E5 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.4	95.2	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.4	95.2	GSM298069	Leaf tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
1.00	0	1003	Ta.3203.2.S1_at	CA621738	-	-	5e-6	At1g27530	-	C.G.	S.X.	Please select
0.37	1e-120	432	Ta.3203.1.S1_at	CK208048	-	-	2e-6	At1g27530	-	C.G.	S.X.	Please select
0.03	3e-1	36	TaAffx.58414.1.S1_at	CA624117	-	-	7e-2	At5g11990	proline-rich family protein	C.G.	S.X.	Please select
0.02	3e-1	36	TaAffx.113362.1.S1_at	CA614327	-	-	2e+0	At3g22060	receptor protein kinase-related	C.G.	S.X.	Please select
0.02	3e-1	36	Ta.28838.2.S1_at	BJ299408	-	-	3e+0	At1g79800	plastocyanin-like domain-containing protein	C.G.	S.X.	Please select
0.02	3e-1	36	Ta.14551.1.S1_at	CK172291	-	-	5e-1	At1g65710	unknown protein	C.G.	S.X.	Please select
0.03	3e-1	36	Ta.14551.2.S1_a_at	CA683143	-	-	2e+1	At5g59950	RNA and export factor-binding protein, putative	C.G.	S.X.	Please select
0.03	1e+0	34	TaAffx.64717.1.S1_at	BJ284726	-	-	8e-2	At2g31440	protein binding	C.G.	S.X.	Please select
0.03	1e+0	34	TaAffx.109122.2.S1_x_at	CA689609	-	-	4e+0	At3g45980	HTB9	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.13	5e-6	52	Arabidopsis thaliana	At1g27530	839644	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOP	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.18	7e-9	61	Glycine max	Gma.17782.1.S1_at	AW734221	-	-	9e-45	At1g27530	-	C.G.	S.X.	Please select
0.43	4e-122	436	Hordeum vulgare	Contig8798_at	Contig8798	-	-	3e-5	At1g27530	-	C.G.	S.X.	Please select
0.45	6e-115	414	Oryza sativa	Os.25439.2.S1_x_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	6e+0	32	Populus trichocarpa	Ptp.544.1.A1_at	CK088526	-	-	1e+0	At3g22010	receptor-like protein kinase-related	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.14	1e-9	61	Vitis vinifera	1606717_at	CA815892	hypothetical protein LOC100264226	-	6e-37	At1g27530	-	C.G.	S.X.	Please select
0.43	1e-143	508	Zea mays	Zm.12556.1.S1_at	CD982182	-	-	2e-9	At1g27530	-	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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