Gene omics information

Query gene ID Ta.3159.1.S1_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5374.9Ta.3159.1.S1_atBJ228678--5e+0At4g27880seven in absentia (SINA) family proteinS.X.H.G.
0.6786.3Ta.9377.3.S1_atCA599079--6e+0At5g63310NDPK2 (NUCLEOSIDE DIPHOSPHATE KINASE 2)S.X.H.G.
0.6081.0Ta.2207.2.S1_a_atCA612248--5e-25At5g05780RPN8A (RP NON-ATPASE SUBUNIT 8A)S.X.H.G.
0.5678.6TaAffx.59779.1.S1_x_atCA595426--2e-5At5g41970-S.X.H.G.
0.4464.5Ta.7274.3.S1_a_atAJ612375--1e-3At1g79650RAD23S.X.H.G.
0.4464.5Ta.30799.3.S1_a_atCA720672--6e-2At5g54580RNA recognition motif (RRM)-containing proteinS.X.H.G.
0.4260.9Ta.7506.2.S1_a_atBJ267303--5e-15At1g27650ATU2AF35AS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
6.598.3GSM298064Crown tissue of Harnesk at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
5.897.9GSM298074Crown tissue of Paragon at 5 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
5.697.8GSM298071Crown tissue of Paragon at 3 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
5.497.7GSM298073Crown tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
5.197.5GSM298072Crown tissue of Paragon at 3 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
5.197.5GSM298062Crown tissue of Harnesk at 5 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
4.897.2GSM298075Crown tissue of Paragon at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
4.897.2GSM298076Crown tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
4.797.1GSM298087Crown tissue of Solstice at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
4.596.9GSM298088Crown tissue of Solstice at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.038e-238TaAffx.114925.1.S1_atCF133462--5e-1At5g25220KNAT3 (KNOTTED1-LIKE HOMEOBOX GENE 3)C.G.S.X.
0.048e-238Ta.10023.1.S1_atBJ236927Ribosomal protein L30-4e+0At4g21920unknown proteinC.G.S.X.
0.033e-136TaAffx.64866.1.A1_atBJ271920--3e-1At3g45230hydroxyproline-rich glycoprotein family proteinC.G.S.X.
0.033e-136TaAffx.114066.1.S1_atCA599372--9e-2At4g16140proline-rich family proteinC.G.S.X.
0.033e-136Ta.7519.2.A1_x_atBJ224989--2e-1At5g61490-C.G.S.X.
0.033e-136Ta.4939.1.S1_atCA640242--1e+0At5g28630glycine-rich proteinC.G.S.X.
0.033e-136Ta.4939.1.S1_x_atCA640242--1e+0At5g28630glycine-rich proteinC.G.S.X.
0.033e-136Ta.10177.2.S1_atBJ305256--1e+0At5g43870phosphoinositide bindingC.G.S.X.
0.031e+034TaAffx.54025.1.S1_atCA686678--1e+0At3g17160unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.025e+032Arabidopsis thalianaAt4g27880828901seven in absentia (SINA) family proteinF:ubiquitin-protein ligase activity, protein binding, zinc ion binding;P:multicellular organismal development, protein ubiquitination, ubiquitin-dependent protein catabolic process;C:mitochondrion, nucleus;MPOF---C.G.S.X.
0.054e-136Glycine maxGmaAffx.44482.1.S1_atBE475065--8e-20At5g42560abscisic acid-responsive HVA22 family proteinC.G.S.X.
0.049e-340Hordeum vulgareEBpi01_SQ003_I06_atEBpi01_SQ003_I06--8e-1At5g63740zinc finger protein-relatedC.G.S.X.
0.056e-446Oryza sativaOs08g0427900AK109208.1-Hin19 (Fragment)5e-5At5g37720RNA and export factor-binding protein, putativeC.G.S.X.
0.034e-136Populus trichocarpaPtpAffx.30743.5.A1_atCV244509hypothetical protein-2e-2At3g61840unknown proteinC.G.S.X.
0.033e-134Vitis vinifera1622137_atCF413644--4e+0At4g08260protein phosphatase 2C, putative / PP2C, putativeC.G.S.X.
0.032e+032Zea maysZm.9892.1.A1_atBM351413--6e-3At3g59060PIL6 (PHYTOCHROME INTERACTING FACTOR 3-LIKE 6)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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