CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.3118.1.S1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.2 Ta.3118.1.S1_at BE515437 - - 5e-4 At1g27140 ATGSTU14 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 14) S.X. H.G.
0.67 86.3 Ta.5629.1.S1_x_at BT009443.1 - - 2e-3 At2g30860 ATGSTF9 (GLUTATHIONE S-TRANSFERASE PHI 9) S.X. H.G.
0.63 83.1 TaAffx.58957.1.S1_x_at CA611386 - - 8e-1 At3g01020 ISU2 (ISCU-LIKE 2) S.X. H.G.
0.50 72.4 Ta.27750.1.S1_at CD373503 pSBGer3 protein - 1e+1 At4g38270 GAUT3 (Galacturonosyltransferase 3) S.X. H.G.
0.40 58.4 Ta.19295.1.S1_at CA649795 - - 2e-2 At5g60200 Dof-type zinc finger domain-containing protein S.X. H.G.
0.38 54.7 Ta.27168.1.S1_at BQ838219 - - 9e-2 At4g13270 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
71.2 100.0 GSM314259 tissue type: germinating seed, embryo - rep3 GSE12508 Transcription patterns during wheat development
56.7 99.9 GSM314255 tissue type: germinating seed, root - rep2 GSE12508 Transcription patterns during wheat development
53.4 99.9 GSM314258 tissue type: germinating seed, embryo - rep2 GSE12508 Transcription patterns during wheat development
51.5 99.9 GSM314256 tissue type: germinating seed, root - rep3 GSE12508 Transcription patterns during wheat development
27.0 99.8 GSM314257 tissue type: germinating seed, embryo - rep1 GSE12508 Transcription patterns during wheat development
17.2 99.6 GSM314254 tissue type: germinating seed, root - rep1 GSE12508 Transcription patterns during wheat development
14.3 99.5 GSM314253 tissue type: germinating seed, coleoptile - rep3 GSE12508 Transcription patterns during wheat development
13.7 99.5 GSM314261 tissue type: seedling, root - rep2 GSE12508 Transcription patterns during wheat development
12.3 99.4 GSM314262 tissue type: seedling, root - rep3 GSE12508 Transcription patterns during wheat development
7.9 98.7 GSM314260 tissue type: seedling, root - rep1 GSE12508 Transcription patterns during wheat development
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.36 6e-127 454 Ta.3118.2.S1_at CA642191 - - 4e+0 At1g78460 SOUL heme-binding family protein C.G. S.X.
0.36 7e-74 278 TaAffx.113716.1.S1_at CA606450 - - 2e-1 At5g38960 germin-like protein, putative C.G. S.X.
0.23 2e-25 117 TaAffx.57935.1.S1_at CA623742 - - 2e-2 At1g10370 ERD9 (EARLY-RESPONSIVE TO DEHYDRATION 9) C.G. S.X.
0.19 1e-23 111 TaAffx.112528.1.S1_at CA623245 - - 1e+0 At1g10360 ATGSTU18 (GLUTATHIONE S-TRANSFERASE TAU 18) C.G. S.X.
0.23 2e-19 97 TaAffx.8388.1.S1_at CA626252 - - 7e-2 At5g15960 KIN1 C.G. S.X.
0.14 2e-19 97 Ta.1333.1.S1_at BT009283.1 - - 9e+0 At1g27140 ATGSTU14 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 14) C.G. S.X.
0.05 4e-17 89 Ta.1457.1.S2_at AJ414698.1 Glutathione transferase - 4e-3 At1g10370 ERD9 (EARLY-RESPONSIVE TO DEHYDRATION 9) C.G. S.X.
0.05 4e-17 89 Ta.1457.1.S1_x_at BJ241436 Glutathione transferase - 4e-3 At1g10370 ERD9 (EARLY-RESPONSIVE TO DEHYDRATION 9) C.G. S.X.
0.05 4e-17 89 Ta.1457.1.S1_s_at BJ241436 Glutathione transferase - 4e-3 At1g10370 ERD9 (EARLY-RESPONSIVE TO DEHYDRATION 9) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 5e-4 46 Arabidopsis thaliana At1g27140 839603 ATGSTU14 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 14) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). - - - C.G. S.X.
0.03 6e-1 36 Glycine max Gma.17538.1.S1_at AF243360.1 glutathione S-transferase GST 5 - 7e-3 At1g59700 ATGSTU16 (GLUTATHIONE S-TRANSFERASE TAU 16) C.G. S.X.
0.80 0 1088 Hordeum vulgare Contig6008_s_at Contig6008 - - 5e-4 At1g27140 ATGSTU14 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 14) C.G. S.X.
0.39 1e-24 115 Oryza sativa Os10g0525400 AF402802.1 - Glutathione S-transferase GST 31 (EC 2.5.1.18) 9e-3 At4g11880 AGL14 (agamous-like 14) C.G. S.X.
0.04 2e+0 34 Populus trichocarpa PtpAffx.225564.1.S1_at pmrna44998 hypothetical protein - 9e-3 At2g29440 ATGSTU6 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 6) C.G. S.X.
0.05 4e-8 57 Vitis vinifera 1617423_at CB969252 hypothetical protein LOC100245065 - 5e-8 At1g10360 ATGSTU18 (GLUTATHIONE S-TRANSFERASE TAU 18) C.G. S.X.
0.55 7e-63 240 Zea mays Zm.559.1.A1_at AF244699.1 glutathione S-transferase GST 34 - 3e-2 At5g62480 ATGSTU9 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 9) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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