Gene omics information

Query gene ID	Ta.30921.1.S1_x_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.54	75.5	Ta.30921.1.S1_x_at	CN012317	-	-	2e-4	At1g09400	12-oxophytodienoate reductase, putative	S.X.	H.G.	Please select
0.71	88.0	Ta.2278.2.S1_at	CK196331	-	-	5e-2	At3g47540	chitinase, putative	S.X.	H.G.	Please select
0.59	79.8	Ta.2278.2.S1_x_at	CK196331	-	-	5e-2	At3g47540	chitinase, putative	S.X.	H.G.	Please select
0.58	79.2	Ta.2278.2.S1_a_at	CK196331	-	-	5e-2	At3g47540	chitinase, putative	S.X.	H.G.	Please select
0.54	75.5	Ta.25627.1.A1_at	CD373418	-	-	8e-2	At2g45050	zinc finger (GATA type) family protein	S.X.	H.G.	Please select
0.50	72.4	Ta.87.1.S1_x_at	BE404592	-	-	2e-3	At3g05950	germin-like protein, putative	S.X.	H.G.	Please select
0.48	69.0	Ta.87.1.S1_at	BE404592	-	-	2e-3	At3g05950	germin-like protein, putative	S.X.	H.G.	Please select
0.39	56.1	Ta.3160.1.S1_at	BJ223960	-	-	5e+0	At4g10870	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
74.0	100.0	GSM314258	tissue type: germinating seed, embryo - rep2	GSE12508	Transcription patterns during wheat development
50.2	99.9	GSM314259	tissue type: germinating seed, embryo - rep3	GSE12508	Transcription patterns during wheat development
43.9	99.9	GSM314251	tissue type: germinating seed, coleoptile - rep1	GSE12508	Transcription patterns during wheat development
41.1	99.9	GSM314255	tissue type: germinating seed, root - rep2	GSE12508	Transcription patterns during wheat development
34.4	99.9	GSM314253	tissue type: germinating seed, coleoptile - rep3	GSE12508	Transcription patterns during wheat development
20.5	99.7	GSM314254	tissue type: germinating seed, root - rep1	GSE12508	Transcription patterns during wheat development
18.8	99.7	GSM314257	tissue type: germinating seed, embryo - rep1	GSE12508	Transcription patterns during wheat development
12.3	99.4	GSM314252	tissue type: germinating seed, coleoptile - rep2	GSE12508	Transcription patterns during wheat development
10.7	99.2	GSM314256	tissue type: germinating seed, root - rep3	GSE12508	Transcription patterns during wheat development
5.3	97.6	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.44	8e-161	567	Ta.30921.2.S1_at	CN013158	-	-	1e+1	At5g48190	unknown protein	C.G.	S.X.	Please select
0.28	6e-100	365	Ta.30921.3.S1_at	CA653402	-	-	2e+1	At5g47170	unknown protein	C.G.	S.X.	Please select
0.25	3e-83	309	Ta.16318.1.S1_at	CA604630	-	-	4e+0	At4g26750	hydroxyproline-rich glycoprotein family protein	C.G.	S.X.	Please select
0.45	4e-70	266	Ta.21158.1.S1_at	CA645154	-	-	3e-5	At1g76680	OPR1	C.G.	S.X.	Please select
0.39	1e-51	204	Ta.25473.1.S1_at	CD452806	-	-	4e-1	At2g06050	OPR3 (OPDA-REDUCTASE 3)	C.G.	S.X.	Please select
0.34	2e-47	190	TaAffx.131227.1.S1_at	CA685834	-	-	9e+0	At1g17990	12-oxophytodienoate reductase, putative	C.G.	S.X.	Please select
0.29	2e-41	171	Ta.18552.1.S1_at	CA638688	-	-	5e-6	At1g09400	12-oxophytodienoate reductase, putative	C.G.	S.X.	Please select
0.50	4e-39	163	Ta.20532.1.S1_at	CA650215	-	-	4e-5	At1g09400	12-oxophytodienoate reductase, putative	C.G.	S.X.	Please select
0.23	1e-33	145	TaAffx.128684.1.S1_at	CD373926	-	-	3e-2	At1g09400	12-oxophytodienoate reductase, putative	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	2e-4	48	Arabidopsis thaliana	At1g09400	837462	12-oxophytodienoate reductase, putative	F:unknown;P:unknown;C:mitochondrion;BOFPAM	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.06	6e-8	59	Glycine max	PsAffx.CL1870Contig1_at	PsAffx.CL1870Contig1	-	-	2e+0	At3g52105	unknown protein	C.G.	S.X.	Please select
0.81	0	1491	Hordeum vulgare	Contig2329_x_at	Contig2329	-	-	1e-2	At1g76680	OPR1	C.G.	S.X.	Please select
0.36	5e-43	176	Oryza sativa	Os06g0215500	AK108079.1	-	Oxo-phytodienoic acid reductase(12-oxophytodienoic acid reductase)	5e-2	At1g09400	12-oxophytodienoate reductase, putative	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	1e+1	32	Populus trichocarpa	PtpAffx.219039.1.S1_at	pmrna34832	hypothetical protein	-	1e+0	At1g09400	12-oxophytodienoate reductase, putative	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.02	7e-1	34	Vitis vinifera	1619976_at	CF604790	hypothetical protein LOC100266753	-	4e-19	At1g20823	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.37	7e-42	171	Zea mays	Zm.10676.1.S1_at	CN845163	12-oxo-phytodienoic acid reductase	-	2e-4	At2g06050	OPR3 (OPDA-REDUCTASE 3)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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