Gene omics information

Query gene ID	Ta.3083.2.A1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	86.3	Ta.3083.2.A1_at	BJ254365	-	-	4e+0	At3g05602	unknown protein	S.X.	H.G.	Please select
0.50	72.4	TaAffx.38268.1.A1_at	BJ242361	-	-	1e+0	At1g21326	VQ motif-containing protein	S.X.	H.G.	Please select
0.46	66.8	Ta.2138.2.S1_at	CA632124	-	-	1e+0	At1g55840	SEC14 cytosolic factor (SEC14) / phosphoglyceride transfer protein	S.X.	H.G.	Please select
0.44	64.5	Ta.14479.3.S1_x_at	CA630294	-	-	7e-18	At2g05830	eukaryotic translation initiation factor 2B family protein / eIF-2B family protein	S.X.	H.G.	Please select
0.43	62.2	Ta.14146.3.S1_x_at	CA697368	-	-	2e+1	At5g24313	unknown protein	S.X.	H.G.	Please select
0.29	39.2	TaAffx.34241.2.S1_x_at	CA722326	-	-	4e+0	At5g51960	-	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
25.8	99.8	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
10.1	99.2	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
8.7	98.9	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
8.4	98.9	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
6.4	98.2	GSM298069	Leaf tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
5.1	97.5	GSM298090	Leaf tissue of Solstice at 5 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
4.2	96.6	GSM138210	genotype B65 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.3	95.0	GSM298068	Leaf tissue of Paragon at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.1	94.5	GSM298089	Leaf tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
2.9	94.0	GSM138163	genotype E5 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
1.00	0	1104	Ta.3083.2.A1_x_at	BJ254365	-	-	4e+0	At3g05602	unknown protein	C.G.	S.X.	Please select
0.65	0	714	Ta.3083.1.A1_s_at	CD893575	-	-	6e+0	At5g13860	ELC-Like (ELCH-like)	C.G.	S.X.	Please select
0.13	1e-3	44	Ta.13411.1.S1_at	BQ608305	-	-	2e+1	At5g02220	unknown protein	C.G.	S.X.	Please select
0.03	3e-1	36	Ta.30765.2.S1_x_at	CA619268	-	-	1e+0	At5g06660	unknown protein	C.G.	S.X.	Please select
0.03	3e-1	36	Ta.30765.2.S1_s_at	CA619268	-	-	1e+0	At5g06660	unknown protein	C.G.	S.X.	Please select
0.03	1e+0	34	TaAffx.131309.1.S1_at	CK207459	-	-	4e-1	At1g06020	pfkB-type carbohydrate kinase family protein	C.G.	S.X.	Please select
0.03	1e+0	34	TaAffx.131309.1.S1_x_at	CK207459	-	-	4e-1	At1g06020	pfkB-type carbohydrate kinase family protein	C.G.	S.X.	Please select
0.03	1e+0	34	TaAffx.114280.1.S1_at	CA595770	-	-	4e+0	At5g26970	unknown protein	C.G.	S.X.	Please select
0.02	1e+0	34	Ta.9577.1.S1_at	BJ250553	-	-	2e-1	At3g59480	pfkB-type carbohydrate kinase family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	4e+0	32	Arabidopsis thaliana	At3g05602	6240662	unknown protein	F:unknown;P:unknown;C:unknown	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.08	2e-2	40	Glycine max	Gma.9876.1.A1_at	AI443587	-	-	3e-4	At3g12400	ELC	C.G.	S.X.	Please select
0.62	6e-161	565	Hordeum vulgare	Contig16341_s_at	Contig16341	-	-	8e+0	At5g13860	ELC-Like (ELCH-like)	C.G.	S.X.	Please select
0.27	1e-48	194	Oryza sativa	Os02g0833300	AK069209.1	-	Tumour susceptibility gene 101 family protein	2e-1	At4g30980	basic helix-loop-helix (bHLH) family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.06	4e-1	36	Populus trichocarpa	Ptp.1914.2.A1_a_at	CV258126	hypothetical protein	-	2e-7	At5g13860	ELC-Like (ELCH-like)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	5e+0	30	Vitis vinifera	1613439_s_at	CF074637	-	-	2e-1	At5g16030	unknown protein	C.G.	S.X.	Please select
0.30	1e-38	159	Zea mays	Zm.12042.1.A1_at	BM416736	-	-	1e+0	At3g58790	GAUT15 (Galacturonosyltransferase 15)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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