Gene omics information

Query gene ID Ta.30790.2.S1_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.2Ta.30790.2.S1_atCD919145--2e-1At3g58850PAR2 (PHY RAPIDLY REGULATED 2)S.X.H.G.
0.9198.2TaAffx.8112.2.S1_s_atCA723801--1e+1At3g13224RNA recognition motif (RRM)-containing proteinS.X.H.G.
0.7790.8TaAffx.8112.1.S1_x_atBQ801783--2e+1At4g32930unknown proteinS.X.H.G.
0.7790.8Ta.30790.1.S1_atCK195596--1e-1At1g12665-S.X.H.G.
0.6383.1Ta.30790.1.S1_a_atCK195596--1e-1At1g12665-S.X.H.G.
0.5072.4Ta.14005.1.S1_x_atCK216207--2e+1At5g45550mob1/phocein family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
48.199.9GSM314274tissue type: floral bracts, before anthesis - rep3GSE12508Transcription patterns during wheat development
46.299.9GSM314273tissue type: floral bracts, before anthesis - rep2GSE12508Transcription patterns during wheat development
29.099.8GSM314272tissue type: floral bracts, before anthesis - rep1GSE12508Transcription patterns during wheat development
6.998.4GSM298094Crown tissue of Solstice at 9 weeks post germinationGSE11774Expression data from cold treated wheat cultivars
5.397.6GSM298081Leaf tissue of Solstice at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
4.997.3GSM298082Leaf tissue of Solstice at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
3.795.8GSM250904TcLr1_7dpi_inoculated_rep1GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.695.6GSM143502Thatcher_Lr34 (resistant), rust inoculated basal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
3.294.8GSM250914Tc_7dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.094.3GSM143519Thatcher_Lr34 (susceptible), rust inoculated distal leaf, replication 2GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.374e-135482Ta.6371.2.S1_x_atBQ579311--7e-1At1g76590zinc-binding family proteinC.G.S.X.
0.311e-119430Ta.30790.3.S1_x_atCA725022--4e+0At5g14410unknown proteinC.G.S.X.
0.358e-118424Ta.6371.3.S1_a_atCA655332--3e-1At1g76590zinc-binding family proteinC.G.S.X.
0.513e-96353Ta.30790.1.S1_a_atCK195596--1e-1At1g12665-C.G.S.X.
0.513e-96353Ta.30790.1.S1_atCK195596--1e-1At1g12665-C.G.S.X.
0.128e-38159Ta.6371.1.A1_atCD872388--5e+0At5g20045unknown proteinC.G.S.X.
0.074e-1273Ta.30204.1.A1_atCK213134--3e-2At4g17900zinc-binding family proteinC.G.S.X.
0.038e-756Ta.4835.1.A1_atCD926106--1e-1At2g25720unknown proteinC.G.S.X.
0.033e-654Ta.28889.1.S1_atCK195001--5e-1At1g54760AGL85 (AGAMOUS-LIKE 85)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e-138Arabidopsis thalianaAt3g58850825054PAR2 (PHY RAPIDLY REGULATED 2)Encodes PHYTOCHROME RAPIDLY REGULATED2 (PAR2), an atypical basic helix-loop-helix (bHLP) protein. Closely related to PAR1 (At2g42870). Up regulated after simulated shade perception. Acts in the nucleus to control plant development and as a negative regulator of shade avoidance response. Functions as transcriptional repressor of auxin-responsive genes SAUR15 (AT4G38850) and SAUR68 (AT1G29510).---C.G.S.X.
0.211e-1275Glycine maxGmaAffx.91067.1.S1_s_atCF806445--3e-20At1g32700zinc-binding family proteinC.G.S.X.
0.7501172Hordeum vulgareContig4250_s_atContig4250--2e-1At1g76590zinc-binding family proteinC.G.S.X.
0.481e-176621Oryza sativaOs04g0591100AK069139.1-Protein of unknown function DUF597 family protein3e-3At4g17900zinc-binding family proteinC.G.S.X.
0.102e-1481Populus trichocarpaPtp.6002.1.S1_s_atCV242323hypothetical protein-5e-20At4g17900zinc-binding family proteinC.G.S.X.
0.193e-1065Vitis vinifera1618411_atCF208851hypothetical protein LOC100261275-4e-20At1g32700zinc-binding family proteinC.G.S.X.
0.164e-1685Zea maysZm.7583.1.A1_atBM339440--2e+1At5g57181unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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