Gene omics information

Query gene ID	Ta.30790.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.2	Ta.30790.1.S1_at	CK195596	-	-	1e-1	At1g12665	-	S.X.	H.G.	Please select
0.80	92.2	Ta.30790.2.S1_at	CD919145	-	-	2e-1	At3g58850	PAR2 (PHY RAPIDLY REGULATED 2)	S.X.	H.G.	Please select
0.80	92.2	Ta.30790.1.S1_a_at	CK195596	-	-	1e-1	At1g12665	-	S.X.	H.G.	Please select
0.73	89.1	TaAffx.8112.2.S1_s_at	CA723801	-	-	1e+1	At3g13224	RNA recognition motif (RRM)-containing protein	S.X.	H.G.	Please select
0.61	82.0	TaAffx.8112.1.S1_x_at	BQ801783	-	-	2e+1	At4g32930	unknown protein	S.X.	H.G.	Please select
0.19	22.4	Ta.26378.1.A1_s_at	CD490910	-	-	2e+0	At2g18530	protein kinase family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
35.6	99.9	GSM314273	tissue type: floral bracts, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
30.7	99.9	GSM314274	tissue type: floral bracts, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
18.8	99.7	GSM314272	tissue type: floral bracts, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
6.6	98.3	GSM298094	Crown tissue of Solstice at 9 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
6.3	98.2	GSM250914	Tc_7dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.2	97.5	GSM143502	Thatcher_Lr34 (resistant), rust inoculated basal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
5.0	97.4	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.9	97.3	GSM250908	Tc_7dpi_inoculated_rep2	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.7	97.1	GSM298082	Leaf tissue of Solstice at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.4	96.8	GSM298081	Leaf tissue of Solstice at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.87	0	1372	Ta.30790.1.S1_a_at	CK195596	-	-	1e-1	At1g12665	-	C.G.	S.X.	Please select
0.51	1e-96	353	Ta.30790.2.S1_at	CD919145	-	-	2e-1	At3g58850	PAR2 (PHY RAPIDLY REGULATED 2)	C.G.	S.X.	Please select
0.17	4e-38	159	Ta.6371.1.A1_at	CD872388	-	-	5e+0	At5g20045	unknown protein	C.G.	S.X.	Please select
0.14	7e-37	155	Ta.6371.2.S1_x_at	BQ579311	-	-	7e-1	At1g76590	zinc-binding family protein	C.G.	S.X.	Please select
0.05	8e-12	71	Ta.30204.1.A1_at	CK213134	-	-	3e-2	At4g17900	zinc-binding family protein	C.G.	S.X.	Please select
0.03	1e-1	38	TaAffx.38382.1.S1_s_at	BJ235350	-	-	1e-5	At2g20280	zinc finger (CCCH-type) family protein	C.G.	S.X.	Please select
0.03	1e-1	38	TaAffx.122663.1.S1_at	CA598319	-	-	2e-4	At1g12665	-	C.G.	S.X.	Please select
0.01	1e-1	38	Ta.5934.1.S1_at	CD888662	-	-	4e-15	At2g20280	zinc finger (CCCH-type) family protein	C.G.	S.X.	Please select
0.03	1e-1	38	Ta.5934.2.S1_x_at	CA659454	-	-	2e-5	At2g20280	zinc finger (CCCH-type) family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	1e-1	38	Arabidopsis thaliana	At1g12665	5007689	-	Encodes a Plant thionin family protein	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	1e-1	38	Glycine max	PsAffx.psZS008xC17f_at	PsAffx.psZS008xC17f	-	-	7e-4	At1g12665	-	C.G.	S.X.	Please select
0.39	3e-93	341	Hordeum vulgare	Contig4250_s_at	Contig4250	-	-	2e-1	At1g76590	zinc-binding family protein	C.G.	S.X.	Please select
0.21	4e-52	206	Oryza sativa	Os04g0591100	AK069139.1	-	Protein of unknown function DUF597 family protein	3e-3	At4g17900	zinc-binding family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	6e-1	36	Populus trichocarpa	PtpAffx.64845.1.S1_at	BU817117	hypothetical protein	-	8e-1	At1g21925	-	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	3e-2	38	Vitis vinifera	1619196_at	CB916796	-	-	1e-15	At1g12070	Rho GDP-dissociation inhibitor family protein	C.G.	S.X.	Please select
0.24	3e-37	155	Zea mays	Zm.11634.1.A1_at	BM379464	Hypothetical protein LOC100192517	-	3e+0	At4g38570	PIS2 (PROBABLE CDP-DIACYLGLYCEROL--INOSITOL 3-PHOSPHATIDYLTRANSFERASE 2)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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