CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Ta.30760.1.A1_x_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.73 89.1 Ta.30760.1.A1_x_at CK198315 - - 3e+1 At4g24910 unknown protein S.X. H.G.
0.73 89.1 Ta.659.5.S1_at CD878955 - - 0 At1g07920 elongation factor 1-alpha / EF-1-alpha S.X. H.G.
0.68 86.5 Ta.30787.1.S1_at BQ802485 - - 6e-38 At1g09690 60S ribosomal protein L21 (RPL21C) S.X. H.G.
0.68 86.5 Ta.28308.1.S1_at BJ217291 - - 2e-15 At3g28900 60S ribosomal protein L34 (RPL34C) S.X. H.G.
0.67 86.3 Ta.1335.1.S1_at BQ842066 - - 4e-85 At5g02960 40S ribosomal protein S23 (RPS23B) S.X. H.G.
0.64 83.6 Ta.28257.1.S1_x_at CK210991 - - 6e-19 At5g46430 60S ribosomal protein L32 (RPL32B) S.X. H.G.
0.63 83.1 Ta.6294.1.S1_s_at CK209216 - - 6e-1 At1g23750 DNA-binding protein-related S.X. H.G.
0.62 82.3 Ta.1335.1.S1_x_at BQ842066 - - 4e-85 At5g02960 40S ribosomal protein S23 (RPS23B) S.X. H.G.
0.60 81.0 Ta.23429.1.S1_at CK203896 Ribosomal protein S7 - 5e-5 At1g48830 40S ribosomal protein S7 (RPS7A) S.X. H.G.
0.59 79.8 Ta.14635.2.S1_a_at BJ225605 Ribosomal Pr 117 - 1e-75 At2g33370 60S ribosomal protein L23 (RPL23B) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
2.5 92.5 GSM139918 Anther leptotene-pachytene rep3 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.5 92.5 GSM138192 genotype B33 developing seed at 5 days after anthesis, biological rep1 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.4 92.0 GSM111176 genotype E5 developing seed at 5 days after anthesis, biological rep1 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
2.2 91.0 GSM111190 genotype G32 developing seed at 5 days after anthesis, biological rep1 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
2.2 91.0 GSM111179 genotype DH95 developing seed at 5 days after anthesis, biological rep2 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
2.2 91.0 GSM139921 Anther diplotene-anaphaseI rep3 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.2 91.0 GSM139922 Anther telophaseI-telophaseII rep1 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.2 91.0 GSM139920 Anther diplotene-anaphaseI rep2 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.2 91.0 GSM111180 genotype C31 developing seed at 5 days after anthesis, biological rep1 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
2.1 90.3 GSM139919 Anther diplotene-anaphaseI rep1 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.25 1e-59 230 Ta.2358.3.S1_x_at CA627906 - - 2e+0 At1g15385 unknown protein C.G. S.X.
0.25 1e-59 230 Ta.2358.3.S1_at CA627906 - - 2e+0 At1g15385 unknown protein C.G. S.X.
0.12 1e-56 220 Ta.2358.1.S1_x_at CA502533 - - 5e-11 At2g20530 ATPHB6 (PROHIBITIN 6) C.G. S.X.
0.01 3e+1 30 TaAffx.34241.1.S1_at CD867928 - - 8e-4 At2g23290 AtMYB70 (myb domain protein 70) C.G. S.X.
0.01 3e+1 30 Ta.48.1.S1_at AB042428.1 uncoupling protein - 7e-4 At3g54110 PUMP1 (PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 1) C.G. S.X.
0.02 3e+1 30 Ta.30786.2.A1_a_at BJ319056 - - 1e+0 At4g03113 unknown protein C.G. S.X.
0.02 3e+1 30 Ta.30786.2.A1_x_at BJ319056 - - 1e+0 At4g03113 unknown protein C.G. S.X.
0.02 3e+1 30 Ta.2340.1.S1_at BF200129 - - 2e-5 At5g57815 cytochrome c oxidase subunit 6b, putative C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 3e+1 30 Arabidopsis thaliana At4g24910 828593 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;POB - - - C.G. S.X.
0.03 9e+0 32 Glycine max Gma.1902.1.A1_at BI094893 - - 6e-2 At3g44220 harpin-induced family protein / HIN1 family protein / harpin-responsive family protein C.G. S.X.
0.16 2e-50 198 Hordeum vulgare Contig3129_at Contig3129 - - 1e-7 At2g20530 ATPHB6 (PROHIBITIN 6) C.G. S.X.
0.02 1e+1 32 Oryza sativa Os08g0131200 AK063493.1 - Plant lipid transfer protein/Par allergen familyprotein 3e-1 At5g42635 glycine-rich protein C.G. S.X.
0.02 4e+1 30 Populus trichocarpa PtpAffx.2265.10.A1_a_at CV246443 hypothetical protein - 2e-4 At1g20693 HMGB2 (HIGH MOBILITY GROUP B 2) C.G. S.X.
0.03 8e+0 30 Vitis vinifera 1608881_at CF372579 - - 2e-1 At4g34690 unknown protein C.G. S.X.
0.02 4e+1 28 Zea mays Zm.5431.1.A1_at CK370980 RALF - 3e+1 At5g65230 AtMYB53 (myb domain protein 53) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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