Gene omics information

Query gene ID	Ta.30755.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.90	94.8	Ta.30755.1.S1_at	CN007962	-	-	1e+0	At3g09750	unknown protein	S.X.	H.G.	Please select
0.91	98.2	Ta.8258.3.S1_at	CN012816	-	-	1e+0	At3g63095	-	S.X.	H.G.	Please select
0.90	94.8	Ta.21020.1.S1_at	CD895774	-	-	3e+0	At3g57710	protein kinase family protein	S.X.	H.G.	Please select
0.90	94.8	Ta.10042.1.S1_at	CK205237	-	-	2e-4	At4g28780	GDSL-motif lipase/hydrolase family protein	S.X.	H.G.	Please select
0.86	94.1	Ta.8258.1.S1_x_at	CN011845	-	-	1e+0	At3g63095	-	S.X.	H.G.	Please select
0.84	93.6	Ta.11619.1.A1_at	CN011986	-	-	2e+1	At3g28958	plastocyanin-like domain-containing protein	S.X.	H.G.	Please select
0.83	93.4	Ta.27766.2.S1_at	CD896218	fasciclin-like protein FLA6	-	1e+1	At3g21150	zinc finger (B-box type) family protein	S.X.	H.G.	Please select
0.82	92.7	Ta.10068.1.S1_at	AL830062	-	-	8e-2	At3g07510	unknown protein	S.X.	H.G.	Please select
0.80	92.2	Ta.5103.1.S1_at	BJ271759	-	-	1e-3	At4g38680	GRP2 (GLYCINE RICH PROTEIN 2)	S.X.	H.G.	Please select
0.76	90.1	Ta.8258.2.S1_at	BJ233335	-	-	1e+0	At3g63095	-	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
5.5	97.8	GSM111243	genotype C10 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
5.3	97.6	GSM111174	genotype G30 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
4.5	96.9	GSM111192	genotype F38a developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
4.3	96.7	GSM111196	genotype J15 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
4.2	96.6	GSM111245	genotype G13 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
4.0	96.3	GSM111224	genotype A81 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.8	96.0	GSM111238	genotype A91 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.8	96.0	GSM111198	genotype A77 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.8	96.0	GSM111228	genotype B65 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.7	95.8	GSM111214	genotype C58 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.60	4e-133	474	Ta.30755.3.S1_at	CA716191	-	-	9e-1	At1g12890	AP2 domain-containing transcription factor, putative	C.G.	S.X.	Please select
0.46	6e-123	440	Ta.30755.2.S1_x_at	CA702464	-	-	1e+0	At5g39170	unknown protein	C.G.	S.X.	Please select
0.45	1e-117	422	Ta.28327.1.S1_x_at	CD916923	-	-	2e+0	At3g57510	ADPG1	C.G.	S.X.	Please select
0.53	2e-113	408	TaAffx.70216.1.S1_s_at	AJ297768.1	-	-	5e-13	At5g19990	RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE 6A)	C.G.	S.X.	Please select
0.49	3e-63	242	Ta.22051.1.S1_x_at	CA717975	-	-	4e+0	At1g08985	DNA binding	C.G.	S.X.	Please select
0.26	1e-43	176	Ta.30757.2.A1_at	CA717906	-	-	1e+0	At5g22000	RHF2A (RING-H2 GROUP F2A)	C.G.	S.X.	Please select
0.26	3e-41	169	Ta.8258.3.S1_at	CN012816	-	-	1e+0	At3g63095	-	C.G.	S.X.	Please select
0.42	1e-40	167	Ta.8258.2.S1_at	BJ233335	-	-	1e+0	At3g63095	-	C.G.	S.X.	Please select
0.23	3e-35	149	Ta.22816.1.S1_x_at	CD885331	type 2 non-specific lipid transfer protein precursor	-	4e+0	At1g24510	T-complex protein 1 epsilon subunit, putative / TCP-1-epsilon, putative / chaperonin, putative	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.06	1e+0	34	Arabidopsis thaliana	At3g09750	820133	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.05	2e+0	34	Glycine max	PsAffx.CL234Contig1_at	PsAffx.CL234Contig1	-	-	5e+0	At2g14285	-	C.G.	S.X.	Please select
0.33	4e-39	161	Hordeum vulgare	Contig150_at	Contig150	-	-	1e+0	At3g63095	-	C.G.	S.X.	Please select
0.07	3e-12	73	Oryza sativa	Os03g0111300	AK062506.1	-	Nonspecific lipid-transfer protein 2 (nsLTP2) (7kDa lipid transfer protein)	3e-1	At3g22275	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	2e+0	34	Populus trichocarpa	PtpAffx.5746.4.S1_s_at	CV225347	-	-	9e-10	At3g02180	SP1L3 (SPIRAL 1-LIKE3)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	2e-2	38	Vitis vinifera	1609442_at	CF373210	hypothetical protein LOC100243127	-	3e-4	At3g05800	transcription factor	C.G.	S.X.	Please select
0.14	2e-12	71	Zea mays	Zm.930.1.A1_at	BE129678	-	-	5e+0	At5g06080	LBD33 (LOB DOMAIN-CONTAINING PROTEIN 33)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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