Gene omics information

Query gene ID	Ta.30590.1.A1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.71	88.0	Ta.30590.1.A1_at	CK205601	-	-	2e+0	At4g15460	glycine-rich protein	S.X.	H.G.	Please select
0.60	81.0	Ta.27912.1.A1_at	BJ214600	-	-	2e-7	At3g45090	2-phosphoglycerate kinase-related	S.X.	H.G.	Please select
0.55	76.8	Ta.9146.2.S1_a_at	BJ217637	-	-	1e-11	At1g74960	FAB1 (FATTY ACID BIOSYNTHESIS 1)	S.X.	H.G.	Please select
0.50	72.4	TaAffx.55626.1.S1_at	BJ276003	-	-	3e-2	At1g11000	MLO4 (MILDEW RESISTANCE LOCUS O 4)	S.X.	H.G.	Please select
0.50	72.4	Ta.9146.2.S1_at	BJ217637	-	-	1e-11	At1g74960	FAB1 (FATTY ACID BIOSYNTHESIS 1)	S.X.	H.G.	Please select
0.44	64.5	Ta.15103.1.S1_at	CA690029	-	-	6e-1	At4g25140	OLEO1 (OLEOSIN 1)	S.X.	H.G.	Please select
0.32	44.4	Ta.11541.1.S1_at	BQ170307	-	-	4e-1	At1g49800	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
111.3	100.0	GSM314277	tissue type: pistil, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
105.8	100.0	GSM314275	tissue type: pistil, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
53.3	99.9	GSM314276	tissue type: pistil, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
7.1	98.5	GSM314267	tissue type: seedling, leaf - rep2	GSE12508	Transcription patterns during wheat development
6.8	98.4	GSM314265	tissue type: seedling, crown - rep3	GSE12508	Transcription patterns during wheat development
5.9	98.0	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.0	97.4	GSM139930	Anther immature pollen rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.2	96.6	GSM314268	tissue type: seedling, leaf - rep3	GSE12508	Transcription patterns during wheat development
4.1	96.4	GSM139926	Anther tetrads rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.2	91.0	GSM314266	tissue type: seedling, leaf - rep1	GSE12508	Transcription patterns during wheat development

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	7e-3	42	TaAffx.25652.1.S1_at	CA697399	-	-	1e-10	At5g09220	AAP2 (AMINO ACID PERMEASE 2)	C.G.	S.X.	Please select
0.03	7e-3	42	TaAffx.25652.1.S1_x_at	CA697399	-	-	1e-10	At5g09220	AAP2 (AMINO ACID PERMEASE 2)	C.G.	S.X.	Please select
0.02	7e-3	42	Ta.6089.1.S1_at	CD890416	-	-	3e-13	At1g50460	HKL1 (HEXOKINASE-LIKE 1)	C.G.	S.X.	Please select
0.02	1e-1	38	Ta.9212.1.S1_at	CA598101	-	-	1e-1	At1g02590	aldehyde oxidase, putative	C.G.	S.X.	Please select
0.03	1e-1	38	Ta.8519.1.A1_at	BQ162008	-	-	1e+0	At5g23710	DNA binding / DNA-directed RNA polymerase	C.G.	S.X.	Please select
0.02	1e-1	38	Ta.10577.1.S1_at	BQ166032	-	-	7e+0	At3g50510	LBD28 (LOB DOMAIN-CONTAINING PROTEIN 28)	C.G.	S.X.	Please select
0.02	2e+0	34	TaAffx.94517.1.S1_at	BJ243990	-	-	4e-2	At1g75550	glycine-rich protein	C.G.	S.X.	Please select
0.03	2e+0	34	TaAffx.94744.1.S1_at	BJ290887	-	-	5e+0	At5g51860	MADS-box protein (AGL72)	C.G.	S.X.	Please select
0.04	2e+0	34	TaAffx.50312.1.S1_at	CA742857	-	-	8e+0	At5g26060	S1 self-incompatibility protein-related	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	2e+0	34	Arabidopsis thaliana	At4g15460	827217	glycine-rich protein	F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;BMOPFVA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	2e+0	34	Glycine max	PsAffx.C324000004_at	PsAffx.C324000004	-	-	3e+0	At5g02000	unknown protein	C.G.	S.X.	Please select
0.03	2e-1	36	Hordeum vulgare	Contig13317_at	Contig13317	-	-	2e+0	At4g15460	glycine-rich protein	C.G.	S.X.	Please select
0.27	1e-64	248	Oryza sativa	Os10g0195600	AK100207.1	-	Transferase family protein	4e+0	At2g42380	bZIP transcription factor family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	2e+0	34	Populus trichocarpa	PtpAffx.220358.1.S1_at	pmrna36736	hypothetical protein	-	1e+1	At5g15860	ATPCME (PRENYLCYSTEINE METHYLESTERASE)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.02	8e+0	30	Vitis vinifera	1616326_at	CF568958	-	-	3e-16	At5g22630	ADT5 (arogenate dehydratase 5)	C.G.	S.X.	Please select
0.11	1e-2	40	Zea mays	ZmAffx.684.1.A1_at	AI734818	transferase family protein	-	1e+1	At5g40620	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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